RNA–Protein interactions for RNA: ENST00000563587.5

SLC9A3R2-204, Transcript of SLC9A3 regulator 2, humanhuman

TSL 2 BASIC

Gene SLC9A3R2, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R2-204ENST00000563587 NISCHQ9Y2I1 1504 aa32.52■■■□□ 2.8
SLC9A3R2-204ENST00000563587 ABCC9O60706 1549 aa29.54■■■□□ 2.32
SLC9A3R2-204ENST00000563587 CCDC180Q9P1Z9 1646 aa29.42■■■□□ 2.3
SLC9A3R2-204ENST00000563587 DNAJC5BQ9UF47 199 aa28.06■■■□□ 2.08
SLC9A3R2-204ENST00000563587 RB1CC1Q8TDY2 1594 aa28.03■■■□□ 2.08
SLC9A3R2-204ENST00000563587 NACADO15069 1562 aa27.79■■■□□ 2.04
SLC9A3R2-204ENST00000563587 UNC13AQ9UPW8 1703 aa27.63■■■□□ 2.01
SLC9A3R2-204ENST00000563587 BICRAQ9NZM4 1560 aa27.39■■□□□ 1.97
SLC9A3R2-204ENST00000563587 MYO15BQ96JP2 1530 aa27.37■■□□□ 1.97
SLC9A3R2-204ENST00000563587 PABPN1Q86U42 306 aaKnown RBP eCLIP27.37■■□□□ 1.974e-9■■■■□ 19.4
SLC9A3R2-204ENST00000563587 DCAF8L2P0C7V8 631 aa27.22■■□□□ 1.95
SLC9A3R2-204ENST00000563587 ZCCHC6Q5VYS8 1495 aaKnown RBP26.92■■□□□ 1.9
SLC9A3R2-204ENST00000563587 DCAF1Q9Y4B6 1507 aa26.9■■□□□ 1.9
SLC9A3R2-204ENST00000563587 SHROOM4Q9ULL8 1493 aa26.89■■□□□ 1.9
SLC9A3R2-204ENST00000563587 CC2D2AQ9P2K1 1620 aa26.77■■□□□ 1.88
SLC9A3R2-204ENST00000563587 SCRIBQ14160 1630 aa26.67■■□□□ 1.86
SLC9A3R2-204ENST00000563587 CECR2Q9BXF3 1484 aa26.66■■□□□ 1.86
SLC9A3R2-204ENST00000563587 EIF4G1Q04637 1599 aaKnown RBP26.64■■□□□ 1.86
SLC9A3R2-204ENST00000563587 DNAJC5Q9H3Z4 198 aa25.93■■□□□ 1.74
SLC9A3R2-204ENST00000563587 NCAPD3P42695 1498 aa25.66■■□□□ 1.7
SLC9A3R2-204ENST00000563587 CUX2O14529 1486 aa25.64■■□□□ 1.69
SLC9A3R2-204ENST00000563587 ATAD2BQ9ULI0 1458 aa25.53■■□□□ 1.68
SLC9A3R2-204ENST00000563587 HMGXB3Q12766 1538 aa25.48■■□□□ 1.67
SLC9A3R2-204ENST00000563587 SMARCA4P51532 1647 aa25.47■■□□□ 1.67
SLC9A3R2-204ENST00000563587 ERCC6Q03468 1493 aa25.44■■□□□ 1.66
SLC9A3R2-204ENST00000563587 SMARCA2P51531 1590 aa25.41■■□□□ 1.66
SLC9A3R2-204ENST00000563587 NESP48681 1621 aa25.36■■□□□ 1.65
SLC9A3R2-204ENST00000563587 PEG3Q9GZU2 1588 aa25.29■■□□□ 1.64
SLC9A3R2-204ENST00000563587 THOC2Q8NI27 1593 aaKnown RBP25.27■■□□□ 1.64
SLC9A3R2-204ENST00000563587 BAZ1AQ9NRL2 1556 aaPredicted RBP25.23■■□□□ 1.63
SLC9A3R2-204ENST00000563587 BAZ1BQ9UIG0 1483 aaKnown RBP25.2■■□□□ 1.62
SLC9A3R2-204ENST00000563587 LAMC3Q9Y6N6 1575 aa25.14■■□□□ 1.62
SLC9A3R2-204ENST00000563587 KIF21AQ7Z4S6 1674 aa25.11■■□□□ 1.61
SLC9A3R2-204ENST00000563587 MROH2BQ7Z745 1585 aa25.06■■□□□ 1.6
SLC9A3R2-204ENST00000563587 PDS5BQ9NTI5 1447 aa24.88■■□□□ 1.57
SLC9A3R2-204ENST00000563587 WDR62O43379 1518 aa24.8■■□□□ 1.56
SLC9A3R2-204ENST00000563587 CADPSQ9ULU8 1353 aa24.79■■□□□ 1.56
SLC9A3R2-204ENST00000563587 WIZO95785 1651 aa24.77■■□□□ 1.56
SLC9A3R2-204ENST00000563587 MRC2Q9UBG0 1479 aa24.76■■□□□ 1.55
SLC9A3R2-204ENST00000563587 CEP164Q9UPV0 1460 aa24.57■■□□□ 1.52
SLC9A3R2-204ENST00000563587 FANCD2Q9BXW9 1451 aa24.52■■□□□ 1.52
SLC9A3R2-204ENST00000563587 CFTRP13569 1480 aa24.51■■□□□ 1.51
SLC9A3R2-204ENST00000563587 TRIM41Q8WV44 630 aa24.5■■□□□ 1.51
SLC9A3R2-204ENST00000563587 URB2Q14146 1524 aaKnown RBP24.42■■□□□ 1.5
SLC9A3R2-204ENST00000563587 TOP2AP11388 1531 aaKnown RBP24.4■■□□□ 1.5
SLC9A3R2-204ENST00000563587 PRDM2Q13029 1718 aa24.39■■□□□ 1.5
SLC9A3R2-204ENST00000563587 RSF1Q96T23 1441 aaPredicted RBP24.38■■□□□ 1.49
SLC9A3R2-204ENST00000563587 OSCARQ8IYS5 282 aa24.25■■□□□ 1.47
SLC9A3R2-204ENST00000563587 RIMBP3CA6NJZ7 1639 aa24.2■■□□□ 1.46
SLC9A3R2-204ENST00000563587 RIMBP3BA6NNM3 1639 aa24.2■■□□□ 1.46
SLC9A3R2-204ENST00000563587 RIMBP3Q9UFD9 1639 aa24.2■■□□□ 1.46
SLC9A3R2-204ENST00000563587 ZNF608Q9ULD9 1512 aaPredicted RBP24.15■■□□□ 1.46
SLC9A3R2-204ENST00000563587 CCDC88BA6NC98 1476 aa24.09■■□□□ 1.45
SLC9A3R2-204ENST00000563587 IFT140Q96RY7 1462 aa24.09■■□□□ 1.45
SLC9A3R2-204ENST00000563587 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
SLC9A3R2-204ENST00000563587 ARHGEF11O15085 1522 aa24.05■■□□□ 1.44
SLC9A3R2-204ENST00000563587 EIF4G3O43432 1585 aaKnown RBP24.04■■□□□ 1.44
SLC9A3R2-204ENST00000563587 TARBP1Q13395 1621 aaKnown RBP23.97■■□□□ 1.43
SLC9A3R2-204ENST00000563587 CHD1O14646 1710 aa23.96■■□□□ 1.43
SLC9A3R2-204ENST00000563587 DNMBPQ6XZF7 1577 aa23.96■■□□□ 1.43
SLC9A3R2-204ENST00000563587 ABCC8Q09428 1581 aa23.92■■□□□ 1.42
SLC9A3R2-204ENST00000563587 AQRO60306 1485 aaKnown RBP eCLIP23.82■■□□□ 1.45e-7■■■■■ 29.6
SLC9A3R2-204ENST00000563587 POLA1P09884 1462 aaPredicted RBP23.81■■□□□ 1.4
SLC9A3R2-204ENST00000563587 ARAP1Q96P48 1450 aa23.8■■□□□ 1.4
SLC9A3R2-204ENST00000563587 CYB5RLQ6IPT4 315 aa23.7■■□□□ 1.38
SLC9A3R2-204ENST00000563587 RAD54L2Q9Y4B4 1467 aa23.68■■□□□ 1.38
SLC9A3R2-204ENST00000563587 WDR97A6NE52 1622 aa23.67■■□□□ 1.38
SLC9A3R2-204ENST00000563587 CLASP1Q7Z460 1538 aa23.67■■□□□ 1.38
SLC9A3R2-204ENST00000563587 SNAPC4Q5SXM2 1469 aa23.59■■□□□ 1.37
SLC9A3R2-204ENST00000563587 SOGA1O94964 1423 aa23.59■■□□□ 1.37
SLC9A3R2-204ENST00000563587 FGD5Q6ZNL6 1462 aa23.58■■□□□ 1.37
SLC9A3R2-204ENST00000563587 TDRD9Q8NDG6 1382 aaKnown RBP23.58■■□□□ 1.37
SLC9A3R2-204ENST00000563587 CUX1P39880 1505 aa23.57■■□□□ 1.36
SLC9A3R2-204ENST00000563587 MAGI1Q96QZ7 1491 aaPredicted RBP23.52■■□□□ 1.36
SLC9A3R2-204ENST00000563587 FBLN2P98095 1184 aa23.52■■□□□ 1.36
SLC9A3R2-204ENST00000563587 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
SLC9A3R2-204ENST00000563587 PBRM1Q86U86 1689 aa23.49■■□□□ 1.35
SLC9A3R2-204ENST00000563587 GRIN2BQ13224 1484 aa23.46■■□□□ 1.35
SLC9A3R2-204ENST00000563587 SUPT5HO00267 1087 aaKnown RBP23.45■■□□□ 1.34
SLC9A3R2-204ENST00000563587 TRHP20396 242 aaPredicted RBP23.45■■□□□ 1.34
SLC9A3R2-204ENST00000563587 SYNJ2O15056 1496 aa23.44■■□□□ 1.34
SLC9A3R2-204ENST00000563587 ABCA5Q8WWZ7 1642 aa23.41■■□□□ 1.34
SLC9A3R2-204ENST00000563587 CHMP7Q8WUX9 453 aaPredicted RBP23.35■■□□□ 1.33
SLC9A3R2-204ENST00000563587 GAPVD1Q14C86 1478 aa23.33■■□□□ 1.33
SLC9A3R2-204ENST00000563587 ABCA10Q8WWZ4 1543 aa23.33■■□□□ 1.32
SLC9A3R2-204ENST00000563587 ERCC6L2Q5T890 1561 aa23.27■■□□□ 1.32
SLC9A3R2-204ENST00000563587 ADAMTS12P58397 1594 aa23.21■■□□□ 1.31
SLC9A3R2-204ENST00000563587 SHROOM2Q13796 1616 aa23.2■■□□□ 1.3
SLC9A3R2-204ENST00000563587 CEP170Q5SW79 1584 aa23.2■■□□□ 1.3
SLC9A3R2-204ENST00000563587 GRIN2AQ12879 1464 aa23.2■■□□□ 1.3
SLC9A3R2-204ENST00000563587 NUP160Q12769 1436 aa23.17■■□□□ 1.3
SLC9A3R2-204ENST00000563587 BIVM-ERCC5R4GMW8 1640 aa23.16■■□□□ 1.3
SLC9A3R2-204ENST00000563587 TOP2BQ02880 1626 aa23.11■■□□□ 1.29
SLC9A3R2-204ENST00000563587 KIF13AQ9H1H9 1805 aa23.1■■□□□ 1.29
SLC9A3R2-204ENST00000563587 WRNQ14191 1432 aaPredicted RBP eCLIP23.06■■□□□ 1.28
SLC9A3R2-204ENST00000563587 ERICH3Q5RHP9 1530 aa23.03■■□□□ 1.28
SLC9A3R2-204ENST00000563587 FHAD1B1AJZ9 1412 aa23.01■■□□□ 1.27
SLC9A3R2-204ENST00000563587 AEBP2Q6ZN18 517 aaPredicted RBP22.94■■□□□ 1.26
SLC9A3R2-204ENST00000563587 RUSC2Q8N2Y8 1516 aa22.92■■□□□ 1.26
SLC9A3R2-204ENST00000563587 PRG4Q92954 1404 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms