Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 KLF2P4-201ENST00000451959 1225 ntBASIC12.24□□□□□ -0.45
CCR9P51686 CTBP2P5-201ENST00000454986 1264 ntBASIC12.24□□□□□ -0.45
CCR9P51686 HLA-J-204ENST00000495278 958 ntBASIC12.24□□□□□ -0.45
CCR9P51686 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.24□□□□□ -0.45
CCR9P51686 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.24□□□□□ -0.45
CCR9P51686 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.24□□□□□ -0.45
CCR9P51686 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.24□□□□□ -0.45
CCR9P51686 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.24□□□□□ -0.45
CCR9P51686 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.24□□□□□ -0.45
CCR9P51686 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.24□□□□□ -0.45
CCR9P51686 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
CCR9P51686 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCR9P51686 AL023803.2-201ENST00000620080 638 ntBASIC12.24□□□□□ -0.45
CCR9P51686 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.24□□□□□ -0.45
CCR9P51686 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.24□□□□□ -0.45
CCR9P51686 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
CCR9P51686 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCR9P51686 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCR9P51686 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CCR9P51686 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCR9P51686 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CCR9P51686 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCR9P51686 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCR9P51686 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.24□□□□□ -0.45
CCR9P51686 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CCR9P51686 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.23□□□□□ -0.45
CCR9P51686 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.23□□□□□ -0.45
CCR9P51686 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.23□□□□□ -0.45
CCR9P51686 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.23□□□□□ -0.45
CCR9P51686 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CCR9P51686 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.23□□□□□ -0.45
CCR9P51686 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.23□□□□□ -0.45
CCR9P51686 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.23□□□□□ -0.45
CCR9P51686 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.23□□□□□ -0.45
CCR9P51686 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 RPL18P13-201ENST00000478088 569 ntBASIC12.23□□□□□ -0.45
CCR9P51686 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CCR9P51686 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.23□□□□□ -0.45
CCR9P51686 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.23□□□□□ -0.45
CCR9P51686 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CCR9P51686 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.23□□□□□ -0.45
CCR9P51686 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.23□□□□□ -0.45
CCR9P51686 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.23□□□□□ -0.45
CCR9P51686 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.23□□□□□ -0.45
CCR9P51686 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CCR9P51686 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.23□□□□□ -0.45
CCR9P51686 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.23□□□□□ -0.45
CCR9P51686 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.23□□□□□ -0.45
CCR9P51686 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.23□□□□□ -0.45
CCR9P51686 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.23□□□□□ -0.45
CCR9P51686 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CCR9P51686 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCR9P51686 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CCR9P51686 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CCR9P51686 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.22□□□□□ -0.45
CCR9P51686 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CCR9P51686 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC12.22□□□□□ -0.45
CCR9P51686 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.22□□□□□ -0.45
CCR9P51686 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.22□□□□□ -0.45
CCR9P51686 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CCR9P51686 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCR9P51686 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms