RNA–Protein interactions for RNA: ENST00000531509.5

NEU3-204, Transcript of neuraminidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEU3, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEU3-204ENST00000531509 NISCHQ9Y2I1 1504 aa29.07■■■□□ 2.24
NEU3-204ENST00000531509 CCDC180Q9P1Z9 1646 aa24.85■■□□□ 1.57
NEU3-204ENST00000531509 SHROOM4Q9ULL8 1493 aa24.54■■□□□ 1.52
NEU3-204ENST00000531509 ZCCHC6Q5VYS8 1495 aaKnown RBP24.5■■□□□ 1.51
NEU3-204ENST00000531509 DCAF8L2P0C7V8 631 aa24.26■■□□□ 1.47
NEU3-204ENST00000531509 SUPT5HO00267 1087 aaKnown RBP23.96■■□□□ 1.43
NEU3-204ENST00000531509 DCAF1Q9Y4B6 1507 aa23.86■■□□□ 1.41
NEU3-204ENST00000531509 ABCC9O60706 1549 aa23.3■■□□□ 1.32
NEU3-204ENST00000531509 MYO15BQ96JP2 1530 aa23.3■■□□□ 1.32
NEU3-204ENST00000531509 SCRIBQ14160 1630 aa23.23■■□□□ 1.31
NEU3-204ENST00000531509 CHIC1Q5VXU3 224 aa23.14■■□□□ 1.29
NEU3-204ENST00000531509 NACADO15069 1562 aa23.07■■□□□ 1.28
NEU3-204ENST00000531509 RSF1Q96T23 1441 aaPredicted RBP22.88■■□□□ 1.25
NEU3-204ENST00000531509 RB1CC1Q8TDY2 1594 aa22.76■■□□□ 1.23
NEU3-204ENST00000531509 CECR2Q9BXF3 1484 aa22.68■■□□□ 1.22
NEU3-204ENST00000531509 MROH2BQ7Z745 1585 aa22.57■■□□□ 1.2
NEU3-204ENST00000531509 LOC105371045A0A1W2PR82 267 aa22.44■■□□□ 1.18
NEU3-204ENST00000531509 WIZO95785 1651 aa22.43■■□□□ 1.18
NEU3-204ENST00000531509 UNC13AQ9UPW8 1703 aa22.37■■□□□ 1.17
NEU3-204ENST00000531509 TRIM41Q8WV44 630 aa22.37■■□□□ 1.17
NEU3-204ENST00000531509 BAZ1AQ9NRL2 1556 aaPredicted RBP22.35■■□□□ 1.17
NEU3-204ENST00000531509 PABPN1Q86U42 306 aaKnown RBP eCLIP22.24■■□□□ 1.15
NEU3-204ENST00000531509 SMARCA4P51532 1647 aa22.19■■□□□ 1.14
NEU3-204ENST00000531509 FAM9AQ8IZU1 332 aaPredicted RBP22.14■■□□□ 1.13
NEU3-204ENST00000531509 BICRAQ9NZM4 1560 aa22.12■■□□□ 1.13
NEU3-204ENST00000531509 PCGF6Q9BYE7 350 aa22.1■■□□□ 1.13
NEU3-204ENST00000531509 TOP2AP11388 1531 aaKnown RBP22.07■■□□□ 1.12
NEU3-204ENST00000531509 CCDC88BA6NC98 1476 aa22■■□□□ 1.11
NEU3-204ENST00000531509 EHMT2Q96KQ7 1210 aa21.95■■□□□ 1.1
NEU3-204ENST00000531509 SMARCA2P51531 1590 aa21.94■■□□□ 1.1
NEU3-204ENST00000531509 EIF4G1Q04637 1599 aaKnown RBP21.93■■□□□ 1.1
NEU3-204ENST00000531509 HRCP23327 699 aa21.85■■□□□ 1.09
NEU3-204ENST00000531509 ABCC8Q09428 1581 aa21.81■■□□□ 1.08
NEU3-204ENST00000531509 PEG3Q9GZU2 1588 aa21.78■■□□□ 1.08
NEU3-204ENST00000531509 TRIM26Q12899 539 aaPredicted RBP21.77■■□□□ 1.08
NEU3-204ENST00000531509 ATAD2BQ9ULI0 1458 aa21.71■■□□□ 1.07
NEU3-204ENST00000531509 BAZ1BQ9UIG0 1483 aaKnown RBP21.64■■□□□ 1.06
NEU3-204ENST00000531509 SOGA1O94964 1423 aa21.56■■□□□ 1.04
NEU3-204ENST00000531509 WRNQ14191 1432 aaPredicted RBP eCLIP21.52■■□□□ 1.033e-13■■■■■ 62.7
NEU3-204ENST00000531509 RUSC2Q8N2Y8 1516 aa21.46■■□□□ 1.03
NEU3-204ENST00000531509 CSRNP3Q8WYN3 585 aa21.46■■□□□ 1.03
NEU3-204ENST00000531509 PPARGC1BQ86YN6 1023 aaKnown RBP21.44■■□□□ 1.02
NEU3-204ENST00000531509 EEA1Q15075 1411 aa21.42■■□□□ 1.02
NEU3-204ENST00000531509 SYNJ1O43426 1573 aa21.38■■□□□ 1.01
NEU3-204ENST00000531509 NCAPD3P42695 1498 aa21.36■■□□□ 1.01
NEU3-204ENST00000531509 UBTFP17480 764 aaKnown RBP21.36■■□□□ 1.01
NEU3-204ENST00000531509 TNIKQ9UKE5 1360 aa21.32■■□□□ 1
NEU3-204ENST00000531509 CEP162Q5TB80 1403 aa21.31■■□□□ 1
NEU3-204ENST00000531509 HMGXB3Q12766 1538 aa21.31■■□□□ 1
NEU3-204ENST00000531509 GOLGA3Q08378 1498 aa21.24■□□□□ 0.99
NEU3-204ENST00000531509 TOP2BQ02880 1626 aa21.16■□□□□ 0.98
NEU3-204ENST00000531509 CEP164Q9UPV0 1460 aa21.16■□□□□ 0.98
NEU3-204ENST00000531509 ZEB1P37275 1124 aaPredicted RBP21.15■□□□□ 0.98
NEU3-204ENST00000531509 TTBK1Q5TCY1 1321 aaPredicted RBP21.15■□□□□ 0.98
NEU3-204ENST00000531509 KIF21BO75037 1637 aa21.1■□□□□ 0.97
NEU3-204ENST00000531509 CFTRP13569 1480 aa21.1■□□□□ 0.97
NEU3-204ENST00000531509 BIVM-ERCC5R4GMW8 1640 aa21.08■□□□□ 0.96
NEU3-204ENST00000531509 RAPGEF2Q9Y4G8 1499 aa21.04■□□□□ 0.96
NEU3-204ENST00000531509 CUX1P39880 1505 aa21.02■□□□□ 0.96
NEU3-204ENST00000531509 CLIP1P30622 1438 aa21■□□□□ 0.95
NEU3-204ENST00000531509 RANGAP1P46060 587 aaPredicted RBP21■□□□□ 0.95
NEU3-204ENST00000531509 CC2D2AQ9P2K1 1620 aa20.97■□□□□ 0.95
NEU3-204ENST00000531509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.96■□□□□ 0.95
NEU3-204ENST00000531509 CADPSQ9ULU8 1353 aa20.94■□□□□ 0.94
NEU3-204ENST00000531509 CCER1Q8TC90 406 aaPredicted RBP20.9■□□□□ 0.94
NEU3-204ENST00000531509 KIF27Q86VH2 1401 aa20.89■□□□□ 0.94
NEU3-204ENST00000531509 PRXQ9BXM0 1461 aa20.88■□□□□ 0.93
NEU3-204ENST00000531509 PRDM2Q13029 1718 aa20.87■□□□□ 0.93
NEU3-204ENST00000531509 VPS8Q8N3P4 1428 aa20.85■□□□□ 0.93
NEU3-204ENST00000531509 ERICH3Q5RHP9 1530 aa20.84■□□□□ 0.93
NEU3-204ENST00000531509 APLP2Q06481 763 aa20.83■□□□□ 0.92
NEU3-204ENST00000531509 CUX2O14529 1486 aa20.75■□□□□ 0.91
NEU3-204ENST00000531509 FANCD2Q9BXW9 1451 aa20.72■□□□□ 0.91
NEU3-204ENST00000531509 FGD5Q6ZNL6 1462 aa20.72■□□□□ 0.91
NEU3-204ENST00000531509 IGF1RP08069 1367 aa20.7■□□□□ 0.9
NEU3-204ENST00000531509 HNRNPUL2Q1KMD3 747 aaKnown RBP20.67■□□□□ 0.9
NEU3-204ENST00000531509 NESP48681 1621 aa20.66■□□□□ 0.9
NEU3-204ENST00000531509 ARAP1Q96P48 1450 aa20.66■□□□□ 0.9
NEU3-204ENST00000531509 CARMIL1Q5VZK9 1371 aa20.61■□□□□ 0.89
NEU3-204ENST00000531509 KANK4Q5T7N3 995 aaPredicted RBP20.56■□□□□ 0.88
NEU3-204ENST00000531509 ARHGAP35Q9NRY4 1499 aa20.56■□□□□ 0.88
NEU3-204ENST00000531509 DNMBPQ6XZF7 1577 aa20.55■□□□□ 0.88
NEU3-204ENST00000531509 RAD54L2Q9Y4B4 1467 aa20.55■□□□□ 0.88
NEU3-204ENST00000531509 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
NEU3-204ENST00000531509 TOPBP1Q92547 1522 aa20.54■□□□□ 0.88
NEU3-204ENST00000531509 POLA1P09884 1462 aaPredicted RBP20.52■□□□□ 0.87
NEU3-204ENST00000531509 LAMC3Q9Y6N6 1575 aa20.48■□□□□ 0.87
NEU3-204ENST00000531509 ABCA10Q8WWZ4 1543 aa20.47■□□□□ 0.87
NEU3-204ENST00000531509 URB2Q14146 1524 aaKnown RBP20.42■□□□□ 0.86
NEU3-204ENST00000531509 PDS5BQ9NTI5 1447 aa20.4■□□□□ 0.86
NEU3-204ENST00000531509 P3H3Q8IVL6 736 aa20.39■□□□□ 0.86
NEU3-204ENST00000531509 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
NEU3-204ENST00000531509 RRBP1Q9P2E9 1410 aaKnown RBP20.31■□□□□ 0.84
NEU3-204ENST00000531509 ATP1B4Q9UN42 357 aaPredicted RBP20.31■□□□□ 0.84
NEU3-204ENST00000531509 CUL7Q14999 1698 aa20.29■□□□□ 0.84
NEU3-204ENST00000531509 DIEXFQ68CQ4 756 aaKnown RBP20.29■□□□□ 0.84
NEU3-204ENST00000531509 CCNB3Q8WWL7 1395 aa20.28■□□□□ 0.84
NEU3-204ENST00000531509 KIF21AQ7Z4S6 1674 aa20.28■□□□□ 0.84
NEU3-204ENST00000531509 FHAD1B1AJZ9 1412 aa20.28■□□□□ 0.84
NEU3-204ENST00000531509 TIAM1Q13009 1591 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms