Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 HIST2H2BC-201ENST00000498492 580 ntBASIC12.18□□□□□ -0.46
HIST1H3AP68431 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 AC138761.6-201ENST00000583997 1423 ntBASIC12.18□□□□□ -0.46
HIST1H3AP68431 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 KRT18P9-201ENST00000604826 1300 ntBASIC12.17□□□□□ -0.46
HIST1H3AP68431 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.17□□□□□ -0.46
HIST1H3AP68431 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 AC005722.1-201ENST00000431878 964 ntBASIC12.17□□□□□ -0.46
HIST1H3AP68431 AC026320.2-201ENST00000434379 478 ntBASIC12.17□□□□□ -0.46
HIST1H3AP68431 AC098934.1-203ENST00000442868 1262 ntBASIC12.17□□□□□ -0.46
HIST1H3AP68431 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 COQ10BP2-201ENST00000513804 724 ntBASIC12.17□□□□□ -0.46
HIST1H3AP68431 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 AC026803.1-201ENST00000569130 274 ntBASIC12.17□□□□□ -0.46
HIST1H3AP68431 AC132825.4-202ENST00000578792 434 ntBASIC12.17□□□□□ -0.46
HIST1H3AP68431 RN7SL665P-201ENST00000578793 300 ntBASIC12.17□□□□□ -0.46
HIST1H3AP68431 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 AL109837.1-201ENST00000603272 613 ntBASIC12.17□□□□□ -0.46
HIST1H3AP68431 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms