Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CHD6Q8TD26 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.73■□□□□ 0.91
CHD6Q8TD26 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHD6Q8TD26 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHD6Q8TD26 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.73■□□□□ 0.91
CHD6Q8TD26 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD6Q8TD26 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD6Q8TD26 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD6Q8TD26 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.72■□□□□ 0.91
CHD6Q8TD26 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD6Q8TD26 ESRRAP1-201ENST00000400596 1257 ntBASIC20.72■□□□□ 0.91
CHD6Q8TD26 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.72■□□□□ 0.91
CHD6Q8TD26 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHD6Q8TD26 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.72■□□□□ 0.91
CHD6Q8TD26 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD6Q8TD26 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.71■□□□□ 0.91
CHD6Q8TD26 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHD6Q8TD26 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD6Q8TD26 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD6Q8TD26 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHD6Q8TD26 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD6Q8TD26 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.71■□□□□ 0.91
CHD6Q8TD26 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHD6Q8TD26 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.71■□□□□ 0.91
CHD6Q8TD26 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.71■□□□□ 0.91
CHD6Q8TD26 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.71■□□□□ 0.91
CHD6Q8TD26 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.71■□□□□ 0.91
CHD6Q8TD26 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CHD6Q8TD26 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CHD6Q8TD26 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CHD6Q8TD26 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.7■□□□□ 0.9
CHD6Q8TD26 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.7■□□□□ 0.9
CHD6Q8TD26 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.7■□□□□ 0.9
CHD6Q8TD26 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHD6Q8TD26 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHD6Q8TD26 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CHD6Q8TD26 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.7■□□□□ 0.9
CHD6Q8TD26 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD6Q8TD26 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD6Q8TD26 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.7■□□□□ 0.9
CHD6Q8TD26 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.7■□□□□ 0.9
CHD6Q8TD26 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CHD6Q8TD26 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD6Q8TD26 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHD6Q8TD26 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD6Q8TD26 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHD6Q8TD26 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CHD6Q8TD26 pRNA.6-201ENST00000610482 90 ntBASIC20.69■□□□□ 0.9
CHD6Q8TD26 pRNA.5-201ENST00000612139 90 ntBASIC20.69■□□□□ 0.9
CHD6Q8TD26 pRNA.11-201ENST00000618423 90 ntBASIC20.69■□□□□ 0.9
CHD6Q8TD26 pRNA.13-201ENST00000619112 90 ntBASIC20.69■□□□□ 0.9
CHD6Q8TD26 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CHD6Q8TD26 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.69■□□□□ 0.9
CHD6Q8TD26 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHD6Q8TD26 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHD6Q8TD26 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.69■□□□□ 0.9
CHD6Q8TD26 MIR4497-201ENST00000583208 89 ntBASIC20.69■□□□□ 0.9
CHD6Q8TD26 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CHD6Q8TD26 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD6Q8TD26 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHD6Q8TD26 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD6Q8TD26 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHD6Q8TD26 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD6Q8TD26 RARRES2P4-201ENST00000514074 484 ntBASIC20.69■□□□□ 0.9
CHD6Q8TD26 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.68■□□□□ 0.9
CHD6Q8TD26 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHD6Q8TD26 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.68■□□□□ 0.9
CHD6Q8TD26 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.68■□□□□ 0.9
CHD6Q8TD26 AC009086.3-201ENST00000623486 1008 ntBASIC20.68■□□□□ 0.9
CHD6Q8TD26 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD6Q8TD26 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CHD6Q8TD26 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD6Q8TD26 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.67■□□□□ 0.9
CHD6Q8TD26 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD6Q8TD26 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD6Q8TD26 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.67■□□□□ 0.9
CHD6Q8TD26 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.67■□□□□ 0.9
CHD6Q8TD26 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.67■□□□□ 0.9
CHD6Q8TD26 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.67■□□□□ 0.9
CHD6Q8TD26 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.67■□□□□ 0.9
CHD6Q8TD26 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHD6Q8TD26 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHD6Q8TD26 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHD6Q8TD26 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.66■□□□□ 0.9
CHD6Q8TD26 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHD6Q8TD26 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHD6Q8TD26 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHD6Q8TD26 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.66■□□□□ 0.9
CHD6Q8TD26 AC133552.2-202ENST00000575694 574 ntBASIC20.66■□□□□ 0.9
CHD6Q8TD26 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHD6Q8TD26 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHD6Q8TD26 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.66■□□□□ 0.9
CHD6Q8TD26 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHD6Q8TD26 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
CHD6Q8TD26 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHD6Q8TD26 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CHD6Q8TD26 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.65■□□□□ 0.9
CHD6Q8TD26 UNC93B5-201ENST00000530315 699 ntBASIC20.65■□□□□ 0.9
CHD6Q8TD26 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.65■□□□□ 0.9
CHD6Q8TD26 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms