RNA–Protein interactions for RNA: ENST00000567895.5

TRAPPC2L-213, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3 BASIC

Gene TRAPPC2L, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-213ENST00000567895 NISCHQ9Y2I1 1504 aa51.82■■■■■ 5.89
TRAPPC2L-213ENST00000567895 CCDC180Q9P1Z9 1646 aa46.03■■■■■ 4.96
TRAPPC2L-213ENST00000567895 ABCC9O60706 1549 aa45.22■■■■■ 4.83
TRAPPC2L-213ENST00000567895 RB1CC1Q8TDY2 1594 aa43.42■■■■■ 4.54
TRAPPC2L-213ENST00000567895 DCAF8L2P0C7V8 631 aa43.39■■■■■ 4.54
TRAPPC2L-213ENST00000567895 NACADO15069 1562 aa43.37■■■■■ 4.53
TRAPPC2L-213ENST00000567895 ZCCHC6Q5VYS8 1495 aaKnown RBP43.13■■■■■ 4.49
TRAPPC2L-213ENST00000567895 MYO15BQ96JP2 1530 aa43.12■■■■■ 4.49
TRAPPC2L-213ENST00000567895 DCAF1Q9Y4B6 1507 aa42.88■■■■■ 4.46
TRAPPC2L-213ENST00000567895 UNC13AQ9UPW8 1703 aa42.34■■■■■ 4.37
TRAPPC2L-213ENST00000567895 PABPN1Q86U42 306 aaKnown RBP eCLIP42.3■■■■■ 4.36
TRAPPC2L-213ENST00000567895 BICRAQ9NZM4 1560 aa42.13■■■■■ 4.33
TRAPPC2L-213ENST00000567895 SCRIBQ14160 1630 aa42■■■■■ 4.31
TRAPPC2L-213ENST00000567895 DNAJC5BQ9UF47 199 aa41.71■■■■■ 4.27
TRAPPC2L-213ENST00000567895 SHROOM4Q9ULL8 1493 aa41.7■■■■■ 4.27
TRAPPC2L-213ENST00000567895 EIF4G1Q04637 1599 aaKnown RBP41.02■■■■■ 4.16
TRAPPC2L-213ENST00000567895 CC2D2AQ9P2K1 1620 aa40.87■■■■■ 4.13
TRAPPC2L-213ENST00000567895 CECR2Q9BXF3 1484 aa40.67■■■■■ 4.1
TRAPPC2L-213ENST00000567895 SMARCA4P51532 1647 aa40.19■■■■■ 4.02
TRAPPC2L-213ENST00000567895 BAZ1AQ9NRL2 1556 aaPredicted RBP40.14■■■■■ 4.02
TRAPPC2L-213ENST00000567895 NCAPD3P42695 1498 aa40.08■■■■■ 4.01
TRAPPC2L-213ENST00000567895 ATAD2BQ9ULI0 1458 aa40.06■■■■■ 4
TRAPPC2L-213ENST00000567895 SMARCA2P51531 1590 aa39.97■■■■□ 3.99
TRAPPC2L-213ENST00000567895 MROH2BQ7Z745 1585 aa39.93■■■■□ 3.98
TRAPPC2L-213ENST00000567895 PEG3Q9GZU2 1588 aa39.82■■■■□ 3.97
TRAPPC2L-213ENST00000567895 HMGXB3Q12766 1538 aa39.81■■■■□ 3.96
TRAPPC2L-213ENST00000567895 BAZ1BQ9UIG0 1483 aaKnown RBP39.69■■■■□ 3.94
TRAPPC2L-213ENST00000567895 RSF1Q96T23 1441 aaPredicted RBP39.47■■■■□ 3.91
TRAPPC2L-213ENST00000567895 WIZO95785 1651 aa39.44■■■■□ 3.9
TRAPPC2L-213ENST00000567895 NESP48681 1621 aa39.11■■■■□ 3.85
TRAPPC2L-213ENST00000567895 TOP2AP11388 1531 aaKnown RBP39.04■■■■□ 3.84
TRAPPC2L-213ENST00000567895 ERCC6Q03468 1493 aa38.98■■■■□ 3.83
TRAPPC2L-213ENST00000567895 LAMC3Q9Y6N6 1575 aa38.96■■■■□ 3.83
TRAPPC2L-213ENST00000567895 CADPSQ9ULU8 1353 aa38.92■■■■□ 3.82
TRAPPC2L-213ENST00000567895 PDS5BQ9NTI5 1447 aa38.77■■■■□ 3.8
TRAPPC2L-213ENST00000567895 CFTRP13569 1480 aa38.64■■■■□ 3.78
TRAPPC2L-213ENST00000567895 CCDC88BA6NC98 1476 aa38.63■■■■□ 3.77
TRAPPC2L-213ENST00000567895 CUX2O14529 1486 aa38.63■■■■□ 3.77
TRAPPC2L-213ENST00000567895 KIF21AQ7Z4S6 1674 aa38.54■■■■□ 3.76
TRAPPC2L-213ENST00000567895 THOC2Q8NI27 1593 aaKnown RBP38.48■■■■□ 3.75
TRAPPC2L-213ENST00000567895 FANCD2Q9BXW9 1451 aa38.41■■■■□ 3.74
TRAPPC2L-213ENST00000567895 SUPT5HO00267 1087 aaKnown RBP38.39■■■■□ 3.74
TRAPPC2L-213ENST00000567895 CEP164Q9UPV0 1460 aa38.35■■■■□ 3.73
TRAPPC2L-213ENST00000567895 MRC2Q9UBG0 1479 aa38.35■■■■□ 3.73
TRAPPC2L-213ENST00000567895 WDR62O43379 1518 aa38.21■■■■□ 3.71
TRAPPC2L-213ENST00000567895 PRDM2Q13029 1718 aa38.15■■■■□ 3.7
TRAPPC2L-213ENST00000567895 URB2Q14146 1524 aaKnown RBP38.04■■■■□ 3.68
TRAPPC2L-213ENST00000567895 ABCC8Q09428 1581 aa37.8■■■■□ 3.64
TRAPPC2L-213ENST00000567895 TOPBP1Q92547 1522 aa37.79■■■■□ 3.64
TRAPPC2L-213ENST00000567895 DNMBPQ6XZF7 1577 aa37.7■■■■□ 3.63
TRAPPC2L-213ENST00000567895 DNAJC5Q9H3Z4 198 aa37.66■■■■□ 3.62
TRAPPC2L-213ENST00000567895 IFT140Q96RY7 1462 aa37.6■■■■□ 3.61
TRAPPC2L-213ENST00000567895 POLA1P09884 1462 aaPredicted RBP37.46■■■■□ 3.59
TRAPPC2L-213ENST00000567895 CUX1P39880 1505 aa37.45■■■■□ 3.59
TRAPPC2L-213ENST00000567895 ZNF608Q9ULD9 1512 aaPredicted RBP37.42■■■■□ 3.58
TRAPPC2L-213ENST00000567895 TARBP1Q13395 1621 aaKnown RBP37.36■■■■□ 3.57
TRAPPC2L-213ENST00000567895 FGD5Q6ZNL6 1462 aa37.34■■■■□ 3.57
TRAPPC2L-213ENST00000567895 SOGA1O94964 1423 aa37.34■■■■□ 3.57
TRAPPC2L-213ENST00000567895 RAD54L2Q9Y4B4 1467 aa37.32■■■■□ 3.56
TRAPPC2L-213ENST00000567895 AQRO60306 1485 aaKnown RBP eCLIP37.23■■■■□ 3.557e-7■■■□□ 15.5
TRAPPC2L-213ENST00000567895 EIF4G3O43432 1585 aaKnown RBP37.21■■■■□ 3.55
TRAPPC2L-213ENST00000567895 WRNQ14191 1432 aaPredicted RBP eCLIP37.19■■■■□ 3.54
TRAPPC2L-213ENST00000567895 TDRD9Q8NDG6 1382 aaKnown RBP37.15■■■■□ 3.54
TRAPPC2L-213ENST00000567895 OSCARQ8IYS5 282 aa37.09■■■■□ 3.53
TRAPPC2L-213ENST00000567895 TOP2BQ02880 1626 aa37.09■■■■□ 3.53
TRAPPC2L-213ENST00000567895 SYNJ1O43426 1573 aa37.05■■■■□ 3.52
TRAPPC2L-213ENST00000567895 WDR97A6NE52 1622 aa37.05■■■■□ 3.52
TRAPPC2L-213ENST00000567895 BIVM-ERCC5R4GMW8 1640 aa37.04■■■■□ 3.52
TRAPPC2L-213ENST00000567895 ABCA10Q8WWZ4 1543 aa37■■■■□ 3.51
TRAPPC2L-213ENST00000567895 GRIN2BQ13224 1484 aa36.9■■■■□ 3.5
TRAPPC2L-213ENST00000567895 GAPVD1Q14C86 1478 aa36.88■■■■□ 3.5
TRAPPC2L-213ENST00000567895 SNAPC4Q5SXM2 1469 aa36.84■■■■□ 3.49
TRAPPC2L-213ENST00000567895 FBLN2P98095 1184 aa36.81■■■■□ 3.48
TRAPPC2L-213ENST00000567895 ABCA5Q8WWZ7 1642 aa36.81■■■■□ 3.48
TRAPPC2L-213ENST00000567895 MAGI1Q96QZ7 1491 aaPredicted RBP36.8■■■■□ 3.48
TRAPPC2L-213ENST00000567895 CHD1O14646 1710 aa36.71■■■■□ 3.47
TRAPPC2L-213ENST00000567895 CHMP7Q8WUX9 453 aaPredicted RBP36.71■■■■□ 3.47
TRAPPC2L-213ENST00000567895 PBRM1Q86U86 1689 aa36.69■■■■□ 3.46
TRAPPC2L-213ENST00000567895 SYNJ2O15056 1496 aa36.67■■■■□ 3.46
TRAPPC2L-213ENST00000567895 ERICH3Q5RHP9 1530 aa36.54■■■■□ 3.44
TRAPPC2L-213ENST00000567895 FHAD1B1AJZ9 1412 aa36.47■■■■□ 3.43
TRAPPC2L-213ENST00000567895 ADAMTS12P58397 1594 aa36.46■■■■□ 3.43
TRAPPC2L-213ENST00000567895 KIF27Q86VH2 1401 aa36.44■■■■□ 3.42
TRAPPC2L-213ENST00000567895 GRIN2AQ12879 1464 aa36.41■■■■□ 3.42
TRAPPC2L-213ENST00000567895 CLASP1Q7Z460 1538 aa36.4■■■■□ 3.42
TRAPPC2L-213ENST00000567895 ARHGEF11O15085 1522 aa36.39■■■■□ 3.42
TRAPPC2L-213ENST00000567895 RIMBP3CA6NJZ7 1639 aa36.37■■■■□ 3.41
TRAPPC2L-213ENST00000567895 RIMBP3BA6NNM3 1639 aa36.37■■■■□ 3.41
TRAPPC2L-213ENST00000567895 RIMBP3Q9UFD9 1639 aa36.37■■■■□ 3.41
TRAPPC2L-213ENST00000567895 IGF1RP08069 1367 aa36.35■■■■□ 3.41
TRAPPC2L-213ENST00000567895 TRIM41Q8WV44 630 aa36.32■■■■□ 3.4
TRAPPC2L-213ENST00000567895 NUP160Q12769 1436 aa36.27■■■■□ 3.4
TRAPPC2L-213ENST00000567895 CEP170Q5SW79 1584 aa36.2■■■■□ 3.39
TRAPPC2L-213ENST00000567895 CYB5RLQ6IPT4 315 aa36.14■■■■□ 3.38
TRAPPC2L-213ENST00000567895 CUL7Q14999 1698 aa36.13■■■■□ 3.37
TRAPPC2L-213ENST00000567895 CARMIL1Q5VZK9 1371 aa36.11■■■■□ 3.37
TRAPPC2L-213ENST00000567895 ARAP1Q96P48 1450 aa36.11■■■■□ 3.37
TRAPPC2L-213ENST00000567895 RUSC2Q8N2Y8 1516 aa36.07■■■■□ 3.36
TRAPPC2L-213ENST00000567895 JPH4Q96JJ6 628 aa35.96■■■■□ 3.35
TRAPPC2L-213ENST00000567895 SHROOM2Q13796 1616 aa35.96■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms