Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
RNF111Q6ZNA4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RNF111Q6ZNA4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF111Q6ZNA4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF111Q6ZNA4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF111Q6ZNA4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RNF111Q6ZNA4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RNF111Q6ZNA4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF111Q6ZNA4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RNF111Q6ZNA4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF111Q6ZNA4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF111Q6ZNA4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF111Q6ZNA4 MIR4281-201ENST00000580852 62 ntBASIC21.71■■□□□ 1.07
RNF111Q6ZNA4 AL451085.2-201ENST00000605085 799 ntBASIC21.71■■□□□ 1.07
RNF111Q6ZNA4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF111Q6ZNA4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF111Q6ZNA4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF111Q6ZNA4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF111Q6ZNA4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF111Q6ZNA4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF111Q6ZNA4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RNF111Q6ZNA4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RNF111Q6ZNA4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
RNF111Q6ZNA4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF111Q6ZNA4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RNF111Q6ZNA4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
RNF111Q6ZNA4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.7■■□□□ 1.06
RNF111Q6ZNA4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.7■■□□□ 1.06
RNF111Q6ZNA4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF111Q6ZNA4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF111Q6ZNA4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF111Q6ZNA4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF111Q6ZNA4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF111Q6ZNA4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF111Q6ZNA4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RNF111Q6ZNA4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF111Q6ZNA4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF111Q6ZNA4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF111Q6ZNA4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF111Q6ZNA4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF111Q6ZNA4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF111Q6ZNA4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF111Q6ZNA4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF111Q6ZNA4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF111Q6ZNA4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF111Q6ZNA4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF111Q6ZNA4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RNF111Q6ZNA4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF111Q6ZNA4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF111Q6ZNA4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF111Q6ZNA4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RNF111Q6ZNA4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF111Q6ZNA4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF111Q6ZNA4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF111Q6ZNA4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF111Q6ZNA4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF111Q6ZNA4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF111Q6ZNA4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF111Q6ZNA4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF111Q6ZNA4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF111Q6ZNA4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF111Q6ZNA4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF111Q6ZNA4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RNF111Q6ZNA4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF111Q6ZNA4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF111Q6ZNA4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF111Q6ZNA4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF111Q6ZNA4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF111Q6ZNA4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RNF111Q6ZNA4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF111Q6ZNA4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF111Q6ZNA4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF111Q6ZNA4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF111Q6ZNA4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF111Q6ZNA4 AC009299.2-201ENST00000482477 511 ntBASIC21.66■■□□□ 1.06
RNF111Q6ZNA4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF111Q6ZNA4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF111Q6ZNA4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF111Q6ZNA4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
RNF111Q6ZNA4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF111Q6ZNA4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RNF111Q6ZNA4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.65■■□□□ 1.06
RNF111Q6ZNA4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF111Q6ZNA4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
RNF111Q6ZNA4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF111Q6ZNA4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RNF111Q6ZNA4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF111Q6ZNA4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF111Q6ZNA4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.64■■□□□ 1.06
RNF111Q6ZNA4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RNF111Q6ZNA4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.64■■□□□ 1.05
RNF111Q6ZNA4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
RNF111Q6ZNA4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF111Q6ZNA4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF111Q6ZNA4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF111Q6ZNA4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF111Q6ZNA4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
RNF111Q6ZNA4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF111Q6ZNA4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF111Q6ZNA4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms