Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC32.5■■■□□ 2.79
PTCH2Q9Y6C5 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
PTCH2Q9Y6C5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
PTCH2Q9Y6C5 HLA-V-202ENST00000446817 847 ntBASIC32.48■■■□□ 2.79
PTCH2Q9Y6C5 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.48■■■□□ 2.79
PTCH2Q9Y6C5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.47■■■□□ 2.79
PTCH2Q9Y6C5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
PTCH2Q9Y6C5 AC145285.7-201ENST00000614819 1539 ntBASIC32.46■■■□□ 2.79
PTCH2Q9Y6C5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.46■■■□□ 2.79
PTCH2Q9Y6C5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.46■■■□□ 2.79
PTCH2Q9Y6C5 AL133380.1-201ENST00000506013 324 ntBASIC32.46■■■□□ 2.79
PTCH2Q9Y6C5 MIR3665-201ENST00000578708 105 ntBASIC32.46■■■□□ 2.79
PTCH2Q9Y6C5 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
PTCH2Q9Y6C5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PTCH2Q9Y6C5 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
PTCH2Q9Y6C5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
PTCH2Q9Y6C5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
PTCH2Q9Y6C5 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.38■■■□□ 2.77
PTCH2Q9Y6C5 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
PTCH2Q9Y6C5 AC087741.3-201ENST00000624270 1347 ntBASIC32.38■■■□□ 2.77
PTCH2Q9Y6C5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.37■■■□□ 2.77
PTCH2Q9Y6C5 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.36■■■□□ 2.77
PTCH2Q9Y6C5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.33■■■□□ 2.77
PTCH2Q9Y6C5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.33■■■□□ 2.77
PTCH2Q9Y6C5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
PTCH2Q9Y6C5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
PTCH2Q9Y6C5 DUX4L28-201ENST00000623687 678 ntBASIC32.31■■■□□ 2.76
PTCH2Q9Y6C5 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.29■■■□□ 2.76
PTCH2Q9Y6C5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.28■■■□□ 2.76
PTCH2Q9Y6C5 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
PTCH2Q9Y6C5 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.25■■■□□ 2.75
PTCH2Q9Y6C5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
PTCH2Q9Y6C5 AC044849.2-201ENST00000606596 710 ntBASIC32.22■■■□□ 2.75
PTCH2Q9Y6C5 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.21■■■□□ 2.75
PTCH2Q9Y6C5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
PTCH2Q9Y6C5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.2■■■□□ 2.75
PTCH2Q9Y6C5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.2■■■□□ 2.75
PTCH2Q9Y6C5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.2■■■□□ 2.75
PTCH2Q9Y6C5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.19■■■□□ 2.74
PTCH2Q9Y6C5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.18■■■□□ 2.74
PTCH2Q9Y6C5 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
PTCH2Q9Y6C5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.15■■■□□ 2.74
PTCH2Q9Y6C5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.14■■■□□ 2.74
PTCH2Q9Y6C5 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.14■■■□□ 2.74
PTCH2Q9Y6C5 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
PTCH2Q9Y6C5 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.13■■■□□ 2.73
PTCH2Q9Y6C5 MIR762-201ENST00000390236 83 ntBASIC32.11■■■□□ 2.73
PTCH2Q9Y6C5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
PTCH2Q9Y6C5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PTCH2Q9Y6C5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.07■■■□□ 2.72
PTCH2Q9Y6C5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.07■■■□□ 2.72
PTCH2Q9Y6C5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
PTCH2Q9Y6C5 ZNRF2P2-203ENST00000454624 420 ntBASIC32.06■■■□□ 2.72
PTCH2Q9Y6C5 AC005559.1-201ENST00000589661 871 ntBASIC32.06■■■□□ 2.72
PTCH2Q9Y6C5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.05■■■□□ 2.72
PTCH2Q9Y6C5 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.04■■■□□ 2.72
PTCH2Q9Y6C5 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.04■■■□□ 2.72
PTCH2Q9Y6C5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
PTCH2Q9Y6C5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC32.02■■■□□ 2.72
PTCH2Q9Y6C5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.01■■■□□ 2.71
PTCH2Q9Y6C5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.99■■■□□ 2.71
PTCH2Q9Y6C5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.99■■■□□ 2.71
PTCH2Q9Y6C5 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.98■■■□□ 2.71
PTCH2Q9Y6C5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PTCH2Q9Y6C5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PTCH2Q9Y6C5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.96■■■□□ 2.71
PTCH2Q9Y6C5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
PTCH2Q9Y6C5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.92■■■□□ 2.7
PTCH2Q9Y6C5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PTCH2Q9Y6C5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
PTCH2Q9Y6C5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.91■■■□□ 2.7
PTCH2Q9Y6C5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.9■■■□□ 2.7
PTCH2Q9Y6C5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PTCH2Q9Y6C5 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PTCH2Q9Y6C5 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PTCH2Q9Y6C5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PTCH2Q9Y6C5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
PTCH2Q9Y6C5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PTCH2Q9Y6C5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PTCH2Q9Y6C5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.84■■■□□ 2.69
PTCH2Q9Y6C5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.83■■■□□ 2.69
PTCH2Q9Y6C5 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PTCH2Q9Y6C5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.81■■■□□ 2.68
PTCH2Q9Y6C5 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PTCH2Q9Y6C5 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PTCH2Q9Y6C5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.8■■■□□ 2.68
PTCH2Q9Y6C5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PTCH2Q9Y6C5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
PTCH2Q9Y6C5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
PTCH2Q9Y6C5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
PTCH2Q9Y6C5 MIR4449-201ENST00000578365 66 ntBASIC31.74■■■□□ 2.67
PTCH2Q9Y6C5 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PTCH2Q9Y6C5 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PTCH2Q9Y6C5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
PTCH2Q9Y6C5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.7■■■□□ 2.67
PTCH2Q9Y6C5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
PTCH2Q9Y6C5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.69■■■□□ 2.66
PTCH2Q9Y6C5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
PTCH2Q9Y6C5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.63■■■□□ 2.65
PTCH2Q9Y6C5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.63■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 8 ms