Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC32.5■■■□□ 2.79
PTCH2Q9Y6C5 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
PTCH2Q9Y6C5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
PTCH2Q9Y6C5 HLA-V-202ENST00000446817 847 ntBASIC32.48■■■□□ 2.79
PTCH2Q9Y6C5 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.48■■■□□ 2.79
PTCH2Q9Y6C5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.47■■■□□ 2.79
PTCH2Q9Y6C5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
PTCH2Q9Y6C5 AC145285.7-201ENST00000614819 1539 ntBASIC32.46■■■□□ 2.79
PTCH2Q9Y6C5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.46■■■□□ 2.79
PTCH2Q9Y6C5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.46■■■□□ 2.79
PTCH2Q9Y6C5 AL133380.1-201ENST00000506013 324 ntBASIC32.46■■■□□ 2.79
PTCH2Q9Y6C5 MIR3665-201ENST00000578708 105 ntBASIC32.46■■■□□ 2.79
PTCH2Q9Y6C5 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
PTCH2Q9Y6C5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PTCH2Q9Y6C5 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
PTCH2Q9Y6C5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
PTCH2Q9Y6C5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
PTCH2Q9Y6C5 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.38■■■□□ 2.77
PTCH2Q9Y6C5 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
PTCH2Q9Y6C5 AC087741.3-201ENST00000624270 1347 ntBASIC32.38■■■□□ 2.77
PTCH2Q9Y6C5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.37■■■□□ 2.77
PTCH2Q9Y6C5 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.36■■■□□ 2.77
PTCH2Q9Y6C5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.33■■■□□ 2.77
PTCH2Q9Y6C5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.33■■■□□ 2.77
PTCH2Q9Y6C5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
PTCH2Q9Y6C5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
PTCH2Q9Y6C5 DUX4L28-201ENST00000623687 678 ntBASIC32.31■■■□□ 2.76
PTCH2Q9Y6C5 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.29■■■□□ 2.76
PTCH2Q9Y6C5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.28■■■□□ 2.76
PTCH2Q9Y6C5 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
PTCH2Q9Y6C5 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.25■■■□□ 2.75
PTCH2Q9Y6C5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
PTCH2Q9Y6C5 AC044849.2-201ENST00000606596 710 ntBASIC32.22■■■□□ 2.75
PTCH2Q9Y6C5 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.21■■■□□ 2.75
PTCH2Q9Y6C5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
PTCH2Q9Y6C5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.2■■■□□ 2.75
PTCH2Q9Y6C5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.2■■■□□ 2.75
PTCH2Q9Y6C5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.2■■■□□ 2.75
PTCH2Q9Y6C5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.19■■■□□ 2.74
PTCH2Q9Y6C5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.18■■■□□ 2.74
PTCH2Q9Y6C5 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
PTCH2Q9Y6C5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.15■■■□□ 2.74
PTCH2Q9Y6C5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.14■■■□□ 2.74
PTCH2Q9Y6C5 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.14■■■□□ 2.74
PTCH2Q9Y6C5 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
PTCH2Q9Y6C5 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.13■■■□□ 2.73
PTCH2Q9Y6C5 MIR762-201ENST00000390236 83 ntBASIC32.11■■■□□ 2.73
PTCH2Q9Y6C5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
PTCH2Q9Y6C5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PTCH2Q9Y6C5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.07■■■□□ 2.72
PTCH2Q9Y6C5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.07■■■□□ 2.72
PTCH2Q9Y6C5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
PTCH2Q9Y6C5 ZNRF2P2-203ENST00000454624 420 ntBASIC32.06■■■□□ 2.72
PTCH2Q9Y6C5 AC005559.1-201ENST00000589661 871 ntBASIC32.06■■■□□ 2.72
PTCH2Q9Y6C5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.05■■■□□ 2.72
PTCH2Q9Y6C5 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.04■■■□□ 2.72
PTCH2Q9Y6C5 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.04■■■□□ 2.72
PTCH2Q9Y6C5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
PTCH2Q9Y6C5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC32.02■■■□□ 2.72
PTCH2Q9Y6C5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.01■■■□□ 2.71
PTCH2Q9Y6C5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.99■■■□□ 2.71
PTCH2Q9Y6C5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.99■■■□□ 2.71
PTCH2Q9Y6C5 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.98■■■□□ 2.71
PTCH2Q9Y6C5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PTCH2Q9Y6C5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PTCH2Q9Y6C5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.96■■■□□ 2.71
PTCH2Q9Y6C5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
PTCH2Q9Y6C5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.92■■■□□ 2.7
PTCH2Q9Y6C5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PTCH2Q9Y6C5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
PTCH2Q9Y6C5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.91■■■□□ 2.7
PTCH2Q9Y6C5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.9■■■□□ 2.7
PTCH2Q9Y6C5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PTCH2Q9Y6C5 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PTCH2Q9Y6C5 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PTCH2Q9Y6C5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PTCH2Q9Y6C5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
PTCH2Q9Y6C5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PTCH2Q9Y6C5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PTCH2Q9Y6C5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.84■■■□□ 2.69
PTCH2Q9Y6C5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.83■■■□□ 2.69
PTCH2Q9Y6C5 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PTCH2Q9Y6C5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.81■■■□□ 2.68
PTCH2Q9Y6C5 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PTCH2Q9Y6C5 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PTCH2Q9Y6C5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.8■■■□□ 2.68
PTCH2Q9Y6C5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PTCH2Q9Y6C5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
PTCH2Q9Y6C5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
PTCH2Q9Y6C5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
PTCH2Q9Y6C5 MIR4449-201ENST00000578365 66 ntBASIC31.74■■■□□ 2.67
PTCH2Q9Y6C5 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PTCH2Q9Y6C5 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PTCH2Q9Y6C5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
PTCH2Q9Y6C5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.7■■■□□ 2.67
PTCH2Q9Y6C5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
PTCH2Q9Y6C5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.69■■■□□ 2.66
PTCH2Q9Y6C5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
PTCH2Q9Y6C5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.63■■■□□ 2.65
PTCH2Q9Y6C5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.63■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms