Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CYP46A1Q9Y6A2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC33.04■■■□□ 2.88
CYP46A1Q9Y6A2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CYP46A1Q9Y6A2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC33.02■■■□□ 2.88
CYP46A1Q9Y6A2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC33.02■■■□□ 2.88
CYP46A1Q9Y6A2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC33■■■□□ 2.87
CYP46A1Q9Y6A2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC33■■■□□ 2.87
CYP46A1Q9Y6A2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.99■■■□□ 2.87
CYP46A1Q9Y6A2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
CYP46A1Q9Y6A2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.99■■■□□ 2.87
CYP46A1Q9Y6A2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CYP46A1Q9Y6A2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
CYP46A1Q9Y6A2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.97■■■□□ 2.87
CYP46A1Q9Y6A2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
CYP46A1Q9Y6A2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CYP46A1Q9Y6A2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC32.95■■■□□ 2.86
CYP46A1Q9Y6A2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CYP46A1Q9Y6A2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC32.93■■■□□ 2.86
CYP46A1Q9Y6A2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CYP46A1Q9Y6A2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
CYP46A1Q9Y6A2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC32.91■■■□□ 2.86
CYP46A1Q9Y6A2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC32.91■■■□□ 2.86
CYP46A1Q9Y6A2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.9■■■□□ 2.86
CYP46A1Q9Y6A2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.89■■■□□ 2.86
CYP46A1Q9Y6A2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC32.89■■■□□ 2.86
CYP46A1Q9Y6A2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CYP46A1Q9Y6A2 AP002365.1-201ENST00000603448 772 ntBASIC32.87■■■□□ 2.85
CYP46A1Q9Y6A2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.86■■■□□ 2.85
CYP46A1Q9Y6A2 AL031258.1-201ENST00000623562 325 ntBASIC32.86■■■□□ 2.85
CYP46A1Q9Y6A2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CYP46A1Q9Y6A2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CYP46A1Q9Y6A2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.85■■■□□ 2.85
CYP46A1Q9Y6A2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC32.85■■■□□ 2.85
CYP46A1Q9Y6A2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CYP46A1Q9Y6A2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CYP46A1Q9Y6A2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.85■■■□□ 2.85
CYP46A1Q9Y6A2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CYP46A1Q9Y6A2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.83■■■□□ 2.85
CYP46A1Q9Y6A2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.82■■■□□ 2.84
CYP46A1Q9Y6A2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC32.81■■■□□ 2.84
CYP46A1Q9Y6A2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CYP46A1Q9Y6A2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
CYP46A1Q9Y6A2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
CYP46A1Q9Y6A2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC32.78■■■□□ 2.84
CYP46A1Q9Y6A2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
CYP46A1Q9Y6A2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.77■■■□□ 2.84
CYP46A1Q9Y6A2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.77■■■□□ 2.84
CYP46A1Q9Y6A2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.76■■■□□ 2.83
CYP46A1Q9Y6A2 AC120057.4-201ENST00000624722 1615 ntBASIC32.76■■■□□ 2.83
CYP46A1Q9Y6A2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
CYP46A1Q9Y6A2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CYP46A1Q9Y6A2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
CYP46A1Q9Y6A2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CYP46A1Q9Y6A2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.68■■■□□ 2.82
CYP46A1Q9Y6A2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CYP46A1Q9Y6A2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.67■■■□□ 2.82
CYP46A1Q9Y6A2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC32.67■■■□□ 2.82
CYP46A1Q9Y6A2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CYP46A1Q9Y6A2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.66■■■□□ 2.82
CYP46A1Q9Y6A2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CYP46A1Q9Y6A2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CYP46A1Q9Y6A2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CYP46A1Q9Y6A2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32.59■■■□□ 2.81
CYP46A1Q9Y6A2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC32.59■■■□□ 2.81
CYP46A1Q9Y6A2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
CYP46A1Q9Y6A2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CYP46A1Q9Y6A2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.54■■■□□ 2.8
CYP46A1Q9Y6A2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
CYP46A1Q9Y6A2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CYP46A1Q9Y6A2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.52■■■□□ 2.8
CYP46A1Q9Y6A2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CYP46A1Q9Y6A2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.52■■■□□ 2.8
CYP46A1Q9Y6A2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CYP46A1Q9Y6A2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
CYP46A1Q9Y6A2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.5■■■□□ 2.79
CYP46A1Q9Y6A2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CYP46A1Q9Y6A2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
CYP46A1Q9Y6A2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CYP46A1Q9Y6A2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CYP46A1Q9Y6A2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CYP46A1Q9Y6A2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
CYP46A1Q9Y6A2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CYP46A1Q9Y6A2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
CYP46A1Q9Y6A2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC32.46■■■□□ 2.79
CYP46A1Q9Y6A2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CYP46A1Q9Y6A2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
CYP46A1Q9Y6A2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
CYP46A1Q9Y6A2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CYP46A1Q9Y6A2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.4■■■□□ 2.78
CYP46A1Q9Y6A2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC32.4■■■□□ 2.78
CYP46A1Q9Y6A2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CYP46A1Q9Y6A2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC32.39■■■□□ 2.78
CYP46A1Q9Y6A2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.39■■■□□ 2.78
CYP46A1Q9Y6A2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32.38■■■□□ 2.77
CYP46A1Q9Y6A2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.38■■■□□ 2.77
CYP46A1Q9Y6A2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
CYP46A1Q9Y6A2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CYP46A1Q9Y6A2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CYP46A1Q9Y6A2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CYP46A1Q9Y6A2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms