Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.7■■□□□ 1.86
PCDHGA6Q9Y5G7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHGA6Q9Y5G7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHGA6Q9Y5G7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHGA6Q9Y5G7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHGA6Q9Y5G7 AC145285.7-201ENST00000614819 1539 ntBASIC26.67■■□□□ 1.86
PCDHGA6Q9Y5G7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.66■■□□□ 1.86
PCDHGA6Q9Y5G7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.64■■□□□ 1.86
PCDHGA6Q9Y5G7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHGA6Q9Y5G7 SUZ12P1-203ENST00000578195 985 ntBASIC26.64■■□□□ 1.86
PCDHGA6Q9Y5G7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHGA6Q9Y5G7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHGA6Q9Y5G7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHGA6Q9Y5G7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.62■■□□□ 1.85
PCDHGA6Q9Y5G7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.62■■□□□ 1.85
PCDHGA6Q9Y5G7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.62■■□□□ 1.85
PCDHGA6Q9Y5G7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHGA6Q9Y5G7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHGA6Q9Y5G7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHGA6Q9Y5G7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHGA6Q9Y5G7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.59■■□□□ 1.85
PCDHGA6Q9Y5G7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHGA6Q9Y5G7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.58■■□□□ 1.85
PCDHGA6Q9Y5G7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.58■■□□□ 1.84
PCDHGA6Q9Y5G7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHGA6Q9Y5G7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHGA6Q9Y5G7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHGA6Q9Y5G7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.55■■□□□ 1.84
PCDHGA6Q9Y5G7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.55■■□□□ 1.84
PCDHGA6Q9Y5G7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.54■■□□□ 1.84
PCDHGA6Q9Y5G7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHGA6Q9Y5G7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHGA6Q9Y5G7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGA6Q9Y5G7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
PCDHGA6Q9Y5G7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHGA6Q9Y5G7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
PCDHGA6Q9Y5G7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHGA6Q9Y5G7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHGA6Q9Y5G7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHGA6Q9Y5G7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
PCDHGA6Q9Y5G7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
PCDHGA6Q9Y5G7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHGA6Q9Y5G7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHGA6Q9Y5G7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHGA6Q9Y5G7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
PCDHGA6Q9Y5G7 CAHM-201ENST00000604200 896 ntBASIC26.41■■□□□ 1.82
PCDHGA6Q9Y5G7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.4■■□□□ 1.82
PCDHGA6Q9Y5G7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHGA6Q9Y5G7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
PCDHGA6Q9Y5G7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHGA6Q9Y5G7 RPS2P35-201ENST00000443417 897 ntBASIC26.37■■□□□ 1.81
PCDHGA6Q9Y5G7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHGA6Q9Y5G7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHGA6Q9Y5G7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHGA6Q9Y5G7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.36■■□□□ 1.81
PCDHGA6Q9Y5G7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHGA6Q9Y5G7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHGA6Q9Y5G7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.35■■□□□ 1.81
PCDHGA6Q9Y5G7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHGA6Q9Y5G7 AL133380.1-201ENST00000506013 324 ntBASIC26.34■■□□□ 1.81
PCDHGA6Q9Y5G7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGA6Q9Y5G7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.32■■□□□ 1.8
PCDHGA6Q9Y5G7 AL391121.1-201ENST00000607967 1349 ntBASIC26.32■■□□□ 1.8
PCDHGA6Q9Y5G7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
PCDHGA6Q9Y5G7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHGA6Q9Y5G7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.29■■□□□ 1.8
PCDHGA6Q9Y5G7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
PCDHGA6Q9Y5G7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHGA6Q9Y5G7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
PCDHGA6Q9Y5G7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHGA6Q9Y5G7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.26■■□□□ 1.79
PCDHGA6Q9Y5G7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHGA6Q9Y5G7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.25■■□□□ 1.79
PCDHGA6Q9Y5G7 AP006261.1-201ENST00000584783 668 ntBASIC26.23■■□□□ 1.79
PCDHGA6Q9Y5G7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHGA6Q9Y5G7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGA6Q9Y5G7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGA6Q9Y5G7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.21■■□□□ 1.79
PCDHGA6Q9Y5G7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHGA6Q9Y5G7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHGA6Q9Y5G7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
PCDHGA6Q9Y5G7 AL162393.1-201ENST00000437852 946 ntBASIC26.18■■□□□ 1.78
PCDHGA6Q9Y5G7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.17■■□□□ 1.78
PCDHGA6Q9Y5G7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHGA6Q9Y5G7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.17■■□□□ 1.78
PCDHGA6Q9Y5G7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGA6Q9Y5G7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.15■■□□□ 1.78
PCDHGA6Q9Y5G7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGA6Q9Y5G7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
PCDHGA6Q9Y5G7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGA6Q9Y5G7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGA6Q9Y5G7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.14■■□□□ 1.77
PCDHGA6Q9Y5G7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHGA6Q9Y5G7 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.12■■□□□ 1.77
PCDHGA6Q9Y5G7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
PCDHGA6Q9Y5G7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.12■■□□□ 1.77
PCDHGA6Q9Y5G7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
PCDHGA6Q9Y5G7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGA6Q9Y5G7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGA6Q9Y5G7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms