Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
DDX41Q9UJV9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
DDX41Q9UJV9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
DDX41Q9UJV9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
DDX41Q9UJV9 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.87■■■□□ 2.69
DDX41Q9UJV9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
DDX41Q9UJV9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.82■■■□□ 2.68
DDX41Q9UJV9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.82■■■□□ 2.68
DDX41Q9UJV9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
DDX41Q9UJV9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
DDX41Q9UJV9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.81■■■□□ 2.68
DDX41Q9UJV9 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
DDX41Q9UJV9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
DDX41Q9UJV9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.79■■■□□ 2.68
DDX41Q9UJV9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.77■■■□□ 2.68
DDX41Q9UJV9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
DDX41Q9UJV9 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
DDX41Q9UJV9 SUZ12P1-203ENST00000578195 985 ntBASIC31.75■■■□□ 2.67
DDX41Q9UJV9 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.75■■■□□ 2.67
DDX41Q9UJV9 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
DDX41Q9UJV9 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
DDX41Q9UJV9 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
DDX41Q9UJV9 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.7■■■□□ 2.66
DDX41Q9UJV9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.66
DDX41Q9UJV9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.69■■■□□ 2.66
DDX41Q9UJV9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
DDX41Q9UJV9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
DDX41Q9UJV9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
DDX41Q9UJV9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
DDX41Q9UJV9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
DDX41Q9UJV9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
DDX41Q9UJV9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
DDX41Q9UJV9 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.61■■■□□ 2.65
DDX41Q9UJV9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.61■■■□□ 2.65
DDX41Q9UJV9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.61■■■□□ 2.65
DDX41Q9UJV9 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.6■■■□□ 2.65
DDX41Q9UJV9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.6■■■□□ 2.65
DDX41Q9UJV9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
DDX41Q9UJV9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.6■■■□□ 2.65
DDX41Q9UJV9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
DDX41Q9UJV9 CAHM-201ENST00000604200 896 ntBASIC31.59■■■□□ 2.65
DDX41Q9UJV9 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
DDX41Q9UJV9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
DDX41Q9UJV9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
DDX41Q9UJV9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.57■■■□□ 2.64
DDX41Q9UJV9 AL133380.1-201ENST00000506013 324 ntBASIC31.57■■■□□ 2.64
DDX41Q9UJV9 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
DDX41Q9UJV9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.55■■■□□ 2.64
DDX41Q9UJV9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.54■■■□□ 2.64
DDX41Q9UJV9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
DDX41Q9UJV9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
DDX41Q9UJV9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
DDX41Q9UJV9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
DDX41Q9UJV9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
DDX41Q9UJV9 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
DDX41Q9UJV9 AL391121.1-201ENST00000607967 1349 ntBASIC31.46■■■□□ 2.63
DDX41Q9UJV9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
DDX41Q9UJV9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
DDX41Q9UJV9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.41■■■□□ 2.62
DDX41Q9UJV9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.4■■■□□ 2.62
DDX41Q9UJV9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
DDX41Q9UJV9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
DDX41Q9UJV9 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
DDX41Q9UJV9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
DDX41Q9UJV9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.36■■■□□ 2.61
DDX41Q9UJV9 RPS2P35-201ENST00000443417 897 ntBASIC31.36■■■□□ 2.61
DDX41Q9UJV9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
DDX41Q9UJV9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.35■■■□□ 2.61
DDX41Q9UJV9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.35■■■□□ 2.61
DDX41Q9UJV9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
DDX41Q9UJV9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.34■■■□□ 2.61
DDX41Q9UJV9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
DDX41Q9UJV9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
DDX41Q9UJV9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
DDX41Q9UJV9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
DDX41Q9UJV9 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
DDX41Q9UJV9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
DDX41Q9UJV9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
DDX41Q9UJV9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.24■■■□□ 2.59
DDX41Q9UJV9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
DDX41Q9UJV9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.23■■■□□ 2.59
DDX41Q9UJV9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.2■■■□□ 2.59
DDX41Q9UJV9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.19■■■□□ 2.58
DDX41Q9UJV9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.19■■■□□ 2.58
DDX41Q9UJV9 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
DDX41Q9UJV9 AL162393.1-201ENST00000437852 946 ntBASIC31.17■■■□□ 2.58
DDX41Q9UJV9 AP006261.1-201ENST00000584783 668 ntBASIC31.16■■■□□ 2.58
DDX41Q9UJV9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
DDX41Q9UJV9 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.13■■■□□ 2.57
DDX41Q9UJV9 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
DDX41Q9UJV9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
DDX41Q9UJV9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
DDX41Q9UJV9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
DDX41Q9UJV9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.12■■■□□ 2.57
DDX41Q9UJV9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.12■■■□□ 2.57
DDX41Q9UJV9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
DDX41Q9UJV9 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.12■■■□□ 2.57
DDX41Q9UJV9 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
DDX41Q9UJV9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
DDX41Q9UJV9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms