Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
RBM28Q9NW13 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.4■■■□□ 2.78
RBM28Q9NW13 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.39■■■□□ 2.78
RBM28Q9NW13 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.39■■■□□ 2.78
RBM28Q9NW13 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
RBM28Q9NW13 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
RBM28Q9NW13 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC32.38■■■□□ 2.77
RBM28Q9NW13 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.36■■■□□ 2.77
RBM28Q9NW13 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
RBM28Q9NW13 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
RBM28Q9NW13 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.34■■■□□ 2.77
RBM28Q9NW13 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.33■■■□□ 2.77
RBM28Q9NW13 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
RBM28Q9NW13 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC32.32■■■□□ 2.76
RBM28Q9NW13 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC32.32■■■□□ 2.76
RBM28Q9NW13 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
RBM28Q9NW13 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RBM28Q9NW13 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
RBM28Q9NW13 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.29■■■□□ 2.76
RBM28Q9NW13 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.29■■■□□ 2.76
RBM28Q9NW13 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.29■■■□□ 2.76
RBM28Q9NW13 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
RBM28Q9NW13 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
RBM28Q9NW13 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
RBM28Q9NW13 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.26■■■□□ 2.75
RBM28Q9NW13 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
RBM28Q9NW13 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RBM28Q9NW13 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.23■■■□□ 2.75
RBM28Q9NW13 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.21■■■□□ 2.75
RBM28Q9NW13 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.19■■■□□ 2.74
RBM28Q9NW13 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
RBM28Q9NW13 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
RBM28Q9NW13 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.13■■■□□ 2.73
RBM28Q9NW13 RARRES2P7-201ENST00000567349 469 ntBASIC32.1■■■□□ 2.73
RBM28Q9NW13 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
RBM28Q9NW13 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
RBM28Q9NW13 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
RBM28Q9NW13 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
RBM28Q9NW13 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.05■■■□□ 2.72
RBM28Q9NW13 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RBM28Q9NW13 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RBM28Q9NW13 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
RBM28Q9NW13 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.04■■■□□ 2.72
RBM28Q9NW13 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
RBM28Q9NW13 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.99■■■□□ 2.71
RBM28Q9NW13 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
RBM28Q9NW13 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
RBM28Q9NW13 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
RBM28Q9NW13 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.95■■■□□ 2.71
RBM28Q9NW13 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
RBM28Q9NW13 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.95■■■□□ 2.7
RBM28Q9NW13 SETD8P1-201ENST00000623146 1180 ntBASIC31.94■■■□□ 2.7
RBM28Q9NW13 AC120057.4-201ENST00000624722 1615 ntBASIC31.93■■■□□ 2.7
RBM28Q9NW13 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.92■■■□□ 2.7
RBM28Q9NW13 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
RBM28Q9NW13 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.92■■■□□ 2.7
RBM28Q9NW13 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
RBM28Q9NW13 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.91■■■□□ 2.7
RBM28Q9NW13 AL133380.1-201ENST00000506013 324 ntBASIC31.91■■■□□ 2.7
RBM28Q9NW13 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.9■■■□□ 2.7
RBM28Q9NW13 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
RBM28Q9NW13 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
RBM28Q9NW13 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
RBM28Q9NW13 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
RBM28Q9NW13 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
RBM28Q9NW13 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
RBM28Q9NW13 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RBM28Q9NW13 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.87■■■□□ 2.69
RBM28Q9NW13 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
RBM28Q9NW13 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
RBM28Q9NW13 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
RBM28Q9NW13 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RBM28Q9NW13 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RBM28Q9NW13 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RBM28Q9NW13 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
RBM28Q9NW13 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
RBM28Q9NW13 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
RBM28Q9NW13 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
RBM28Q9NW13 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
RBM28Q9NW13 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
RBM28Q9NW13 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
RBM28Q9NW13 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
RBM28Q9NW13 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RBM28Q9NW13 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
RBM28Q9NW13 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
RBM28Q9NW13 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.74■■■□□ 2.67
RBM28Q9NW13 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
RBM28Q9NW13 AC136428.2-201ENST00000563187 214 ntBASIC31.72■■■□□ 2.67
RBM28Q9NW13 AC097358.2-201ENST00000607541 1159 ntBASIC31.71■■■□□ 2.67
RBM28Q9NW13 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.7■■■□□ 2.67
RBM28Q9NW13 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
RBM28Q9NW13 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.7■■■□□ 2.67
RBM28Q9NW13 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
RBM28Q9NW13 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
RBM28Q9NW13 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.68■■■□□ 2.66
RBM28Q9NW13 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RBM28Q9NW13 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
RBM28Q9NW13 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
RBM28Q9NW13 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
RBM28Q9NW13 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.66■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms