Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
RBM28Q9NW13 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.4■■■□□ 2.78
RBM28Q9NW13 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.39■■■□□ 2.78
RBM28Q9NW13 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.39■■■□□ 2.78
RBM28Q9NW13 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
RBM28Q9NW13 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
RBM28Q9NW13 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC32.38■■■□□ 2.77
RBM28Q9NW13 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.36■■■□□ 2.77
RBM28Q9NW13 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
RBM28Q9NW13 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
RBM28Q9NW13 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.34■■■□□ 2.77
RBM28Q9NW13 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.33■■■□□ 2.77
RBM28Q9NW13 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
RBM28Q9NW13 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC32.32■■■□□ 2.76
RBM28Q9NW13 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC32.32■■■□□ 2.76
RBM28Q9NW13 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
RBM28Q9NW13 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RBM28Q9NW13 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
RBM28Q9NW13 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.29■■■□□ 2.76
RBM28Q9NW13 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.29■■■□□ 2.76
RBM28Q9NW13 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.29■■■□□ 2.76
RBM28Q9NW13 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
RBM28Q9NW13 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
RBM28Q9NW13 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
RBM28Q9NW13 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.26■■■□□ 2.75
RBM28Q9NW13 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
RBM28Q9NW13 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RBM28Q9NW13 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.23■■■□□ 2.75
RBM28Q9NW13 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.21■■■□□ 2.75
RBM28Q9NW13 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.19■■■□□ 2.74
RBM28Q9NW13 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
RBM28Q9NW13 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
RBM28Q9NW13 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.13■■■□□ 2.73
RBM28Q9NW13 RARRES2P7-201ENST00000567349 469 ntBASIC32.1■■■□□ 2.73
RBM28Q9NW13 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
RBM28Q9NW13 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
RBM28Q9NW13 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
RBM28Q9NW13 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
RBM28Q9NW13 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.05■■■□□ 2.72
RBM28Q9NW13 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RBM28Q9NW13 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RBM28Q9NW13 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
RBM28Q9NW13 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.04■■■□□ 2.72
RBM28Q9NW13 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
RBM28Q9NW13 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.99■■■□□ 2.71
RBM28Q9NW13 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
RBM28Q9NW13 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
RBM28Q9NW13 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
RBM28Q9NW13 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.95■■■□□ 2.71
RBM28Q9NW13 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
RBM28Q9NW13 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.95■■■□□ 2.7
RBM28Q9NW13 SETD8P1-201ENST00000623146 1180 ntBASIC31.94■■■□□ 2.7
RBM28Q9NW13 AC120057.4-201ENST00000624722 1615 ntBASIC31.93■■■□□ 2.7
RBM28Q9NW13 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.92■■■□□ 2.7
RBM28Q9NW13 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
RBM28Q9NW13 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.92■■■□□ 2.7
RBM28Q9NW13 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
RBM28Q9NW13 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.91■■■□□ 2.7
RBM28Q9NW13 AL133380.1-201ENST00000506013 324 ntBASIC31.91■■■□□ 2.7
RBM28Q9NW13 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.9■■■□□ 2.7
RBM28Q9NW13 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
RBM28Q9NW13 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
RBM28Q9NW13 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
RBM28Q9NW13 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
RBM28Q9NW13 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
RBM28Q9NW13 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
RBM28Q9NW13 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RBM28Q9NW13 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.87■■■□□ 2.69
RBM28Q9NW13 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
RBM28Q9NW13 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
RBM28Q9NW13 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
RBM28Q9NW13 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RBM28Q9NW13 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RBM28Q9NW13 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RBM28Q9NW13 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
RBM28Q9NW13 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
RBM28Q9NW13 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
RBM28Q9NW13 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
RBM28Q9NW13 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
RBM28Q9NW13 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
RBM28Q9NW13 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
RBM28Q9NW13 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
RBM28Q9NW13 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RBM28Q9NW13 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
RBM28Q9NW13 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
RBM28Q9NW13 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.74■■■□□ 2.67
RBM28Q9NW13 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
RBM28Q9NW13 AC136428.2-201ENST00000563187 214 ntBASIC31.72■■■□□ 2.67
RBM28Q9NW13 AC097358.2-201ENST00000607541 1159 ntBASIC31.71■■■□□ 2.67
RBM28Q9NW13 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.7■■■□□ 2.67
RBM28Q9NW13 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
RBM28Q9NW13 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.7■■■□□ 2.67
RBM28Q9NW13 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
RBM28Q9NW13 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
RBM28Q9NW13 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.68■■■□□ 2.66
RBM28Q9NW13 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RBM28Q9NW13 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
RBM28Q9NW13 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
RBM28Q9NW13 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
RBM28Q9NW13 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.66■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms