Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.79■■■□□ 2.36
CISHQ9NSE2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
CISHQ9NSE2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
CISHQ9NSE2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.78■■■□□ 2.36
CISHQ9NSE2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
CISHQ9NSE2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.75■■■□□ 2.35
CISHQ9NSE2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CISHQ9NSE2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.75■■■□□ 2.35
CISHQ9NSE2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CISHQ9NSE2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CISHQ9NSE2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.73■■■□□ 2.35
CISHQ9NSE2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CISHQ9NSE2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CISHQ9NSE2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
CISHQ9NSE2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.72■■■□□ 2.35
CISHQ9NSE2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CISHQ9NSE2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.71■■■□□ 2.35
CISHQ9NSE2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CISHQ9NSE2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.7■■■□□ 2.35
CISHQ9NSE2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.69■■■□□ 2.34
CISHQ9NSE2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.68■■■□□ 2.34
CISHQ9NSE2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CISHQ9NSE2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.66■■■□□ 2.34
CISHQ9NSE2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
CISHQ9NSE2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CISHQ9NSE2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.62■■■□□ 2.33
CISHQ9NSE2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CISHQ9NSE2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.6■■■□□ 2.33
CISHQ9NSE2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CISHQ9NSE2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.59■■■□□ 2.33
CISHQ9NSE2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.58■■■□□ 2.33
CISHQ9NSE2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.58■■■□□ 2.33
CISHQ9NSE2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.56■■■□□ 2.32
CISHQ9NSE2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CISHQ9NSE2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
CISHQ9NSE2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
CISHQ9NSE2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.49■■■□□ 2.31
CISHQ9NSE2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.48■■■□□ 2.31
CISHQ9NSE2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
CISHQ9NSE2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.45■■■□□ 2.31
CISHQ9NSE2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.45■■■□□ 2.31
CISHQ9NSE2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.44■■■□□ 2.3
CISHQ9NSE2 RARRES2P7-201ENST00000567349 469 ntBASIC29.44■■■□□ 2.3
CISHQ9NSE2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CISHQ9NSE2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CISHQ9NSE2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
CISHQ9NSE2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CISHQ9NSE2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
CISHQ9NSE2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CISHQ9NSE2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CISHQ9NSE2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.39■■■□□ 2.3
CISHQ9NSE2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
CISHQ9NSE2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CISHQ9NSE2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.37■■■□□ 2.29
CISHQ9NSE2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CISHQ9NSE2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CISHQ9NSE2 AC120057.4-201ENST00000624722 1615 ntBASIC29.36■■■□□ 2.29
CISHQ9NSE2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CISHQ9NSE2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.35■■■□□ 2.29
CISHQ9NSE2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CISHQ9NSE2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
CISHQ9NSE2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CISHQ9NSE2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CISHQ9NSE2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CISHQ9NSE2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CISHQ9NSE2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CISHQ9NSE2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CISHQ9NSE2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CISHQ9NSE2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CISHQ9NSE2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CISHQ9NSE2 SETD8P1-201ENST00000623146 1180 ntBASIC29.3■■■□□ 2.28
CISHQ9NSE2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
CISHQ9NSE2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CISHQ9NSE2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CISHQ9NSE2 AL133380.1-201ENST00000506013 324 ntBASIC29.28■■■□□ 2.28
CISHQ9NSE2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
CISHQ9NSE2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CISHQ9NSE2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CISHQ9NSE2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.27■■■□□ 2.28
CISHQ9NSE2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
CISHQ9NSE2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
CISHQ9NSE2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CISHQ9NSE2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CISHQ9NSE2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.21■■■□□ 2.27
CISHQ9NSE2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CISHQ9NSE2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CISHQ9NSE2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
CISHQ9NSE2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.16■■■□□ 2.26
CISHQ9NSE2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
CISHQ9NSE2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CISHQ9NSE2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CISHQ9NSE2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CISHQ9NSE2 AC136428.2-201ENST00000563187 214 ntBASIC29.12■■■□□ 2.25
CISHQ9NSE2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CISHQ9NSE2 AC097358.2-201ENST00000607541 1159 ntBASIC29.11■■■□□ 2.25
CISHQ9NSE2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CISHQ9NSE2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.1■■■□□ 2.25
CISHQ9NSE2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.1■■■□□ 2.25
CISHQ9NSE2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
CISHQ9NSE2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms