Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.04■■■□□ 2.56
ATP6V0A4Q9HBG4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
ATP6V0A4Q9HBG4 SETD8P1-201ENST00000623146 1180 ntBASIC31.03■■■□□ 2.56
ATP6V0A4Q9HBG4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
ATP6V0A4Q9HBG4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
ATP6V0A4Q9HBG4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ATP6V0A4Q9HBG4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31■■■□□ 2.55
ATP6V0A4Q9HBG4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ATP6V0A4Q9HBG4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
ATP6V0A4Q9HBG4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.97■■■□□ 2.55
ATP6V0A4Q9HBG4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ATP6V0A4Q9HBG4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.96■■■□□ 2.55
ATP6V0A4Q9HBG4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.94■■■□□ 2.54
ATP6V0A4Q9HBG4 AC136428.2-201ENST00000563187 214 ntBASIC30.93■■■□□ 2.54
ATP6V0A4Q9HBG4 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
ATP6V0A4Q9HBG4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
ATP6V0A4Q9HBG4 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
ATP6V0A4Q9HBG4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
ATP6V0A4Q9HBG4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
ATP6V0A4Q9HBG4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.85■■■□□ 2.53
ATP6V0A4Q9HBG4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
ATP6V0A4Q9HBG4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.84■■■□□ 2.53
ATP6V0A4Q9HBG4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.83■■■□□ 2.53
ATP6V0A4Q9HBG4 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
ATP6V0A4Q9HBG4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.8■■■□□ 2.52
ATP6V0A4Q9HBG4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
ATP6V0A4Q9HBG4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.77■■■□□ 2.52
ATP6V0A4Q9HBG4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
ATP6V0A4Q9HBG4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
ATP6V0A4Q9HBG4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.76■■■□□ 2.51
ATP6V0A4Q9HBG4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
ATP6V0A4Q9HBG4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
ATP6V0A4Q9HBG4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.75■■■□□ 2.51
ATP6V0A4Q9HBG4 SUZ12P1-203ENST00000578195 985 ntBASIC30.75■■■□□ 2.51
ATP6V0A4Q9HBG4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
ATP6V0A4Q9HBG4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ATP6V0A4Q9HBG4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
ATP6V0A4Q9HBG4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ATP6V0A4Q9HBG4 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
ATP6V0A4Q9HBG4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ATP6V0A4Q9HBG4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
ATP6V0A4Q9HBG4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ATP6V0A4Q9HBG4 AL133380.1-201ENST00000506013 324 ntBASIC30.66■■■□□ 2.5
ATP6V0A4Q9HBG4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.66■■■□□ 2.5
ATP6V0A4Q9HBG4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ATP6V0A4Q9HBG4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.64■■■□□ 2.5
ATP6V0A4Q9HBG4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
ATP6V0A4Q9HBG4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
ATP6V0A4Q9HBG4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
ATP6V0A4Q9HBG4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.63■■■□□ 2.49
ATP6V0A4Q9HBG4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
ATP6V0A4Q9HBG4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
ATP6V0A4Q9HBG4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ATP6V0A4Q9HBG4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.49
ATP6V0A4Q9HBG4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.59■■■□□ 2.49
ATP6V0A4Q9HBG4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
ATP6V0A4Q9HBG4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.58■■■□□ 2.49
ATP6V0A4Q9HBG4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ATP6V0A4Q9HBG4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ATP6V0A4Q9HBG4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
ATP6V0A4Q9HBG4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ATP6V0A4Q9HBG4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
ATP6V0A4Q9HBG4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.56■■■□□ 2.48
ATP6V0A4Q9HBG4 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
ATP6V0A4Q9HBG4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
ATP6V0A4Q9HBG4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ATP6V0A4Q9HBG4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.52■■■□□ 2.48
ATP6V0A4Q9HBG4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.52■■■□□ 2.48
ATP6V0A4Q9HBG4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ATP6V0A4Q9HBG4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
ATP6V0A4Q9HBG4 CAHM-201ENST00000604200 896 ntBASIC30.51■■■□□ 2.47
ATP6V0A4Q9HBG4 RPS2P35-201ENST00000443417 897 ntBASIC30.5■■■□□ 2.47
ATP6V0A4Q9HBG4 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
ATP6V0A4Q9HBG4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
ATP6V0A4Q9HBG4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
ATP6V0A4Q9HBG4 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
ATP6V0A4Q9HBG4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
ATP6V0A4Q9HBG4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
ATP6V0A4Q9HBG4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
ATP6V0A4Q9HBG4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
ATP6V0A4Q9HBG4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.42■■■□□ 2.46
ATP6V0A4Q9HBG4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ATP6V0A4Q9HBG4 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.42■■■□□ 2.46
ATP6V0A4Q9HBG4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ATP6V0A4Q9HBG4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ATP6V0A4Q9HBG4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ATP6V0A4Q9HBG4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ATP6V0A4Q9HBG4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
ATP6V0A4Q9HBG4 AL391121.1-201ENST00000607967 1349 ntBASIC30.4■■■□□ 2.46
ATP6V0A4Q9HBG4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
ATP6V0A4Q9HBG4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.37■■■□□ 2.45
ATP6V0A4Q9HBG4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
ATP6V0A4Q9HBG4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
ATP6V0A4Q9HBG4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
ATP6V0A4Q9HBG4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.34■■■□□ 2.45
ATP6V0A4Q9HBG4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
ATP6V0A4Q9HBG4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ATP6V0A4Q9HBG4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ATP6V0A4Q9HBG4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.27■■■□□ 2.44
ATP6V0A4Q9HBG4 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms