Protein–RNA interactions for Protein: Q9H0X6

RNF208, RING finger protein 208, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF208Q9H0X6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
RNF208Q9H0X6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
RNF208Q9H0X6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.17■■■□□ 2.74
RNF208Q9H0X6 MIR3665-201ENST00000578708 105 ntBASIC32.16■■■□□ 2.74
RNF208Q9H0X6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
RNF208Q9H0X6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
RNF208Q9H0X6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.14■■■□□ 2.74
RNF208Q9H0X6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.13■■■□□ 2.73
RNF208Q9H0X6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.13■■■□□ 2.73
RNF208Q9H0X6 HLA-V-202ENST00000446817 847 ntBASIC32.12■■■□□ 2.73
RNF208Q9H0X6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC32.11■■■□□ 2.73
RNF208Q9H0X6 AC145285.7-201ENST00000614819 1539 ntBASIC32.1■■■□□ 2.73
RNF208Q9H0X6 AL133380.1-201ENST00000506013 324 ntBASIC32.1■■■□□ 2.73
RNF208Q9H0X6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.1■■■□□ 2.73
RNF208Q9H0X6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73
RNF208Q9H0X6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
RNF208Q9H0X6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RNF208Q9H0X6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
RNF208Q9H0X6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.06■■■□□ 2.72
RNF208Q9H0X6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.05■■■□□ 2.72
RNF208Q9H0X6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.04■■■□□ 2.72
RNF208Q9H0X6 AC087741.3-201ENST00000624270 1347 ntBASIC32.02■■■□□ 2.72
RNF208Q9H0X6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.71
RNF208Q9H0X6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.01■■■□□ 2.71
RNF208Q9H0X6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
RNF208Q9H0X6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
RNF208Q9H0X6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
RNF208Q9H0X6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.97■■■□□ 2.71
RNF208Q9H0X6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.94■■■□□ 2.7
RNF208Q9H0X6 DUX4L28-201ENST00000623687 678 ntBASIC31.93■■■□□ 2.7
RNF208Q9H0X6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.91■■■□□ 2.7
RNF208Q9H0X6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
RNF208Q9H0X6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
RNF208Q9H0X6 AC044849.2-201ENST00000606596 710 ntBASIC31.9■■■□□ 2.7
RNF208Q9H0X6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.89■■■□□ 2.7
RNF208Q9H0X6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
RNF208Q9H0X6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RNF208Q9H0X6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
RNF208Q9H0X6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.85■■■□□ 2.69
RNF208Q9H0X6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.84■■■□□ 2.69
RNF208Q9H0X6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
RNF208Q9H0X6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.84■■■□□ 2.69
RNF208Q9H0X6 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.83■■■□□ 2.69
RNF208Q9H0X6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
RNF208Q9H0X6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.8■■■□□ 2.68
RNF208Q9H0X6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.78■■■□□ 2.68
RNF208Q9H0X6 MIR762-201ENST00000390236 83 ntBASIC31.77■■■□□ 2.68
RNF208Q9H0X6 AC005559.1-201ENST00000589661 871 ntBASIC31.75■■■□□ 2.67
RNF208Q9H0X6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.75■■■□□ 2.67
RNF208Q9H0X6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.74■■■□□ 2.67
RNF208Q9H0X6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RNF208Q9H0X6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.73■■■□□ 2.67
RNF208Q9H0X6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.73■■■□□ 2.67
RNF208Q9H0X6 ZNRF2P2-203ENST00000454624 420 ntBASIC31.72■■■□□ 2.67
RNF208Q9H0X6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.71■■■□□ 2.67
RNF208Q9H0X6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.71■■■□□ 2.67
RNF208Q9H0X6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.71■■■□□ 2.67
RNF208Q9H0X6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
RNF208Q9H0X6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.67■■■□□ 2.66
RNF208Q9H0X6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.65■■■□□ 2.66
RNF208Q9H0X6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
RNF208Q9H0X6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.65■■■□□ 2.66
RNF208Q9H0X6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
RNF208Q9H0X6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
RNF208Q9H0X6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RNF208Q9H0X6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RNF208Q9H0X6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
RNF208Q9H0X6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.61■■■□□ 2.65
RNF208Q9H0X6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.59■■■□□ 2.65
RNF208Q9H0X6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
RNF208Q9H0X6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.58■■■□□ 2.65
RNF208Q9H0X6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RNF208Q9H0X6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.57■■■□□ 2.64
RNF208Q9H0X6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
RNF208Q9H0X6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.53■■■□□ 2.64
RNF208Q9H0X6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
RNF208Q9H0X6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
RNF208Q9H0X6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
RNF208Q9H0X6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
RNF208Q9H0X6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RNF208Q9H0X6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.47■■■□□ 2.63
RNF208Q9H0X6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RNF208Q9H0X6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RNF208Q9H0X6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.44■■■□□ 2.62
RNF208Q9H0X6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.43■■■□□ 2.62
RNF208Q9H0X6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
RNF208Q9H0X6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
RNF208Q9H0X6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
RNF208Q9H0X6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RNF208Q9H0X6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
RNF208Q9H0X6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
RNF208Q9H0X6 MIR4449-201ENST00000578365 66 ntBASIC31.38■■■□□ 2.61
RNF208Q9H0X6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
RNF208Q9H0X6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.36■■■□□ 2.61
RNF208Q9H0X6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.36■■■□□ 2.61
RNF208Q9H0X6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.35■■■□□ 2.61
RNF208Q9H0X6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
RNF208Q9H0X6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RNF208Q9H0X6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RNF208Q9H0X6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.29■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms