Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AL133380.1-201ENST00000506013 324 ntBASIC33.06■■■□□ 2.88
PTPN18Q99952 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
PTPN18Q99952 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC33.03■■■□□ 2.88
PTPN18Q99952 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
PTPN18Q99952 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC33.03■■■□□ 2.88
PTPN18Q99952 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
PTPN18Q99952 HNRNPLP2-201ENST00000568980 1570 ntBASIC33.01■■■□□ 2.88
PTPN18Q99952 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
PTPN18Q99952 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
PTPN18Q99952 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.97■■■□□ 2.87
PTPN18Q99952 ABHD17AP4-201ENST00000411545 909 ntBASIC32.97■■■□□ 2.87
PTPN18Q99952 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
PTPN18Q99952 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
PTPN18Q99952 MIR7108-201ENST00000614319 87 ntBASIC32.95■■■□□ 2.87
PTPN18Q99952 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
PTPN18Q99952 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.92■■■□□ 2.86
PTPN18Q99952 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.91■■■□□ 2.86
PTPN18Q99952 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC32.88■■■□□ 2.85
PTPN18Q99952 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
PTPN18Q99952 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.87■■■□□ 2.85
PTPN18Q99952 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.86■■■□□ 2.85
PTPN18Q99952 MIR3665-201ENST00000578708 105 ntBASIC32.86■■■□□ 2.85
PTPN18Q99952 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.85■■■□□ 2.85
PTPN18Q99952 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
PTPN18Q99952 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.83■■■□□ 2.85
PTPN18Q99952 AC087741.3-201ENST00000624270 1347 ntBASIC32.81■■■□□ 2.84
PTPN18Q99952 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.81■■■□□ 2.84
PTPN18Q99952 PVT1-219ENST00000523427 938 ntTSL 3 BASIC32.81■■■□□ 2.84
PTPN18Q99952 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
PTPN18Q99952 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC32.76■■■□□ 2.84
PTPN18Q99952 DUX4L28-201ENST00000623687 678 ntBASIC32.76■■■□□ 2.83
PTPN18Q99952 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
PTPN18Q99952 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
PTPN18Q99952 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.73■■■□□ 2.83
PTPN18Q99952 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.73■■■□□ 2.83
PTPN18Q99952 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
PTPN18Q99952 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
PTPN18Q99952 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.67■■■□□ 2.82
PTPN18Q99952 MBP-237ENST00000579129 1052 ntTSL 5 BASIC32.66■■■□□ 2.82
PTPN18Q99952 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.66■■■□□ 2.82
PTPN18Q99952 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC32.65■■■□□ 2.82
PTPN18Q99952 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.64■■■□□ 2.82
PTPN18Q99952 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PTPN18Q99952 MIR762-201ENST00000390236 83 ntBASIC32.62■■■□□ 2.81
PTPN18Q99952 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
PTPN18Q99952 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.61■■■□□ 2.81
PTPN18Q99952 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.61■■■□□ 2.81
PTPN18Q99952 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
PTPN18Q99952 HLA-V-202ENST00000446817 847 ntBASIC32.59■■■□□ 2.81
PTPN18Q99952 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
PTPN18Q99952 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.57■■■□□ 2.8
PTPN18Q99952 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.57■■■□□ 2.8
PTPN18Q99952 AC044849.2-201ENST00000606596 710 ntBASIC32.57■■■□□ 2.8
PTPN18Q99952 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.55■■■□□ 2.8
PTPN18Q99952 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.55■■■□□ 2.8
PTPN18Q99952 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
PTPN18Q99952 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.52■■■□□ 2.8
PTPN18Q99952 AC005559.1-201ENST00000589661 871 ntBASIC32.52■■■□□ 2.8
PTPN18Q99952 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
PTPN18Q99952 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.5■■■□□ 2.79
PTPN18Q99952 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC32.47■■■□□ 2.79
PTPN18Q99952 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
PTPN18Q99952 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
PTPN18Q99952 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
PTPN18Q99952 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC32.43■■■□□ 2.78
PTPN18Q99952 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC32.43■■■□□ 2.78
PTPN18Q99952 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.43■■■□□ 2.78
PTPN18Q99952 ZNRF2P2-203ENST00000454624 420 ntBASIC32.4■■■□□ 2.78
PTPN18Q99952 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.38■■■□□ 2.77
PTPN18Q99952 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.37■■■□□ 2.77
PTPN18Q99952 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PTPN18Q99952 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PTPN18Q99952 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.36■■■□□ 2.77
PTPN18Q99952 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.36■■■□□ 2.77
PTPN18Q99952 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.36■■■□□ 2.77
PTPN18Q99952 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.34■■■□□ 2.77
PTPN18Q99952 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.33■■■□□ 2.77
PTPN18Q99952 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.33■■■□□ 2.77
PTPN18Q99952 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
PTPN18Q99952 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
PTPN18Q99952 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
PTPN18Q99952 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PTPN18Q99952 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PTPN18Q99952 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
PTPN18Q99952 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.3■■■□□ 2.76
PTPN18Q99952 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC32.3■■■□□ 2.76
PTPN18Q99952 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
PTPN18Q99952 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.28■■■□□ 2.76
PTPN18Q99952 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
PTPN18Q99952 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PTPN18Q99952 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
PTPN18Q99952 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
PTPN18Q99952 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
PTPN18Q99952 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.23■■■□□ 2.75
PTPN18Q99952 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
PTPN18Q99952 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
PTPN18Q99952 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.19■■■□□ 2.74
PTPN18Q99952 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PTPN18Q99952 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.17■■■□□ 2.74
PTPN18Q99952 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms