Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.56■■□□□ 1.04
DUX3Q96PT4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.55■■□□□ 1.04
DUX3Q96PT4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DUX3Q96PT4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.53■■□□□ 1.04
DUX3Q96PT4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.52■■□□□ 1.03
DUX3Q96PT4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
DUX3Q96PT4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.51■■□□□ 1.03
DUX3Q96PT4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DUX3Q96PT4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DUX3Q96PT4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.5■■□□□ 1.03
DUX3Q96PT4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DUX3Q96PT4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DUX3Q96PT4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
DUX3Q96PT4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
DUX3Q96PT4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
DUX3Q96PT4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DUX3Q96PT4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.45■■□□□ 1.02
DUX3Q96PT4 SUZ12P1-203ENST00000578195 985 ntBASIC21.45■■□□□ 1.02
DUX3Q96PT4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DUX3Q96PT4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DUX3Q96PT4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DUX3Q96PT4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DUX3Q96PT4 AL133380.1-201ENST00000506013 324 ntBASIC21.4■■□□□ 1.02
DUX3Q96PT4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
DUX3Q96PT4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.39■■□□□ 1.01
DUX3Q96PT4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DUX3Q96PT4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.38■■□□□ 1.01
DUX3Q96PT4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.38■■□□□ 1.01
DUX3Q96PT4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
DUX3Q96PT4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DUX3Q96PT4 CAHM-201ENST00000604200 896 ntBASIC21.37■■□□□ 1.01
DUX3Q96PT4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DUX3Q96PT4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DUX3Q96PT4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
DUX3Q96PT4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DUX3Q96PT4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DUX3Q96PT4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DUX3Q96PT4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
DUX3Q96PT4 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC21.33■■□□□ 1
DUX3Q96PT4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DUX3Q96PT4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DUX3Q96PT4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC21.31■■□□□ 1
DUX3Q96PT4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DUX3Q96PT4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.3■■□□□ 1
DUX3Q96PT4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.3■■□□□ 1
DUX3Q96PT4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DUX3Q96PT4 AL391121.1-201ENST00000607967 1349 ntBASIC21.29■■□□□ 1
DUX3Q96PT4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DUX3Q96PT4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
DUX3Q96PT4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.28■■□□□ 1
DUX3Q96PT4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DUX3Q96PT4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
DUX3Q96PT4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DUX3Q96PT4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.25■□□□□ 0.99
DUX3Q96PT4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.24■□□□□ 0.99
DUX3Q96PT4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DUX3Q96PT4 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DUX3Q96PT4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DUX3Q96PT4 RPS2P35-201ENST00000443417 897 ntBASIC21.23■□□□□ 0.99
DUX3Q96PT4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
DUX3Q96PT4 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DUX3Q96PT4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DUX3Q96PT4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DUX3Q96PT4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DUX3Q96PT4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.19■□□□□ 0.98
DUX3Q96PT4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DUX3Q96PT4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DUX3Q96PT4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DUX3Q96PT4 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DUX3Q96PT4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DUX3Q96PT4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.17■□□□□ 0.98
DUX3Q96PT4 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DUX3Q96PT4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.15■□□□□ 0.98
DUX3Q96PT4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.13■□□□□ 0.97
DUX3Q96PT4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DUX3Q96PT4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DUX3Q96PT4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DUX3Q96PT4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DUX3Q96PT4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.11■□□□□ 0.97
DUX3Q96PT4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DUX3Q96PT4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.1■□□□□ 0.97
DUX3Q96PT4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DUX3Q96PT4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
DUX3Q96PT4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DUX3Q96PT4 AL162393.1-201ENST00000437852 946 ntBASIC21.09■□□□□ 0.97
DUX3Q96PT4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DUX3Q96PT4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DUX3Q96PT4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DUX3Q96PT4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DUX3Q96PT4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
DUX3Q96PT4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DUX3Q96PT4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
DUX3Q96PT4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
DUX3Q96PT4 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.06■□□□□ 0.96
DUX3Q96PT4 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
DUX3Q96PT4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.06■□□□□ 0.96
DUX3Q96PT4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DUX3Q96PT4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DUX3Q96PT4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.04■□□□□ 0.96
DUX3Q96PT4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms