Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.25■■■□□ 2.27
ZSWIM3Q96MP5 AL133380.1-201ENST00000506013 324 ntBASIC29.25■■■□□ 2.27
ZSWIM3Q96MP5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ZSWIM3Q96MP5 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
ZSWIM3Q96MP5 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ZSWIM3Q96MP5 AL391121.1-201ENST00000607967 1349 ntBASIC29.21■■■□□ 2.27
ZSWIM3Q96MP5 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
ZSWIM3Q96MP5 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
ZSWIM3Q96MP5 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
ZSWIM3Q96MP5 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
ZSWIM3Q96MP5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
ZSWIM3Q96MP5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.16■■■□□ 2.26
ZSWIM3Q96MP5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.16■■■□□ 2.26
ZSWIM3Q96MP5 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
ZSWIM3Q96MP5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
ZSWIM3Q96MP5 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
ZSWIM3Q96MP5 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.13■■■□□ 2.25
ZSWIM3Q96MP5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.13■■■□□ 2.25
ZSWIM3Q96MP5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.13■■■□□ 2.25
ZSWIM3Q96MP5 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
ZSWIM3Q96MP5 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
ZSWIM3Q96MP5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29.1■■■□□ 2.25
ZSWIM3Q96MP5 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
ZSWIM3Q96MP5 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
ZSWIM3Q96MP5 AL162393.1-201ENST00000437852 946 ntBASIC29.09■■■□□ 2.25
ZSWIM3Q96MP5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
ZSWIM3Q96MP5 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
ZSWIM3Q96MP5 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
ZSWIM3Q96MP5 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
ZSWIM3Q96MP5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
ZSWIM3Q96MP5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.02■■■□□ 2.24
ZSWIM3Q96MP5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
ZSWIM3Q96MP5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29■■■□□ 2.23
ZSWIM3Q96MP5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29■■■□□ 2.23
ZSWIM3Q96MP5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
ZSWIM3Q96MP5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.99■■■□□ 2.23
ZSWIM3Q96MP5 AP006261.1-201ENST00000584783 668 ntBASIC28.99■■■□□ 2.23
ZSWIM3Q96MP5 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
ZSWIM3Q96MP5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
ZSWIM3Q96MP5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.97■■■□□ 2.23
ZSWIM3Q96MP5 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.96■■■□□ 2.23
ZSWIM3Q96MP5 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.96■■■□□ 2.23
ZSWIM3Q96MP5 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.96■■■□□ 2.23
ZSWIM3Q96MP5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
ZSWIM3Q96MP5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
ZSWIM3Q96MP5 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.94■■■□□ 2.22
ZSWIM3Q96MP5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
ZSWIM3Q96MP5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
ZSWIM3Q96MP5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.91■■■□□ 2.22
ZSWIM3Q96MP5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
ZSWIM3Q96MP5 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.88■■■□□ 2.21
ZSWIM3Q96MP5 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
ZSWIM3Q96MP5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
ZSWIM3Q96MP5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
ZSWIM3Q96MP5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.84■■■□□ 2.21
ZSWIM3Q96MP5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
ZSWIM3Q96MP5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
ZSWIM3Q96MP5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.83■■■□□ 2.21
ZSWIM3Q96MP5 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
ZSWIM3Q96MP5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
ZSWIM3Q96MP5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
ZSWIM3Q96MP5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.79■■■□□ 2.2
ZSWIM3Q96MP5 MIR3665-201ENST00000578708 105 ntBASIC28.78■■■□□ 2.2
ZSWIM3Q96MP5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ZSWIM3Q96MP5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
ZSWIM3Q96MP5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.77■■■□□ 2.2
ZSWIM3Q96MP5 DUX4L28-201ENST00000623687 678 ntBASIC28.75■■■□□ 2.19
ZSWIM3Q96MP5 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.74■■■□□ 2.19
ZSWIM3Q96MP5 MIR762-201ENST00000390236 83 ntBASIC28.74■■■□□ 2.19
ZSWIM3Q96MP5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
ZSWIM3Q96MP5 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.73■■■□□ 2.19
ZSWIM3Q96MP5 AC087741.3-201ENST00000624270 1347 ntBASIC28.72■■■□□ 2.19
ZSWIM3Q96MP5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ZSWIM3Q96MP5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
ZSWIM3Q96MP5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
ZSWIM3Q96MP5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
ZSWIM3Q96MP5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.69■■■□□ 2.18
ZSWIM3Q96MP5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.67■■■□□ 2.18
ZSWIM3Q96MP5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
ZSWIM3Q96MP5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
ZSWIM3Q96MP5 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
ZSWIM3Q96MP5 AC005559.1-201ENST00000589661 871 ntBASIC28.64■■■□□ 2.18
ZSWIM3Q96MP5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
ZSWIM3Q96MP5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.62■■■□□ 2.17
ZSWIM3Q96MP5 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
ZSWIM3Q96MP5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
ZSWIM3Q96MP5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.6■■■□□ 2.17
ZSWIM3Q96MP5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.59■■■□□ 2.17
ZSWIM3Q96MP5 ABHD17AP4-201ENST00000411545 909 ntBASIC28.59■■■□□ 2.17
ZSWIM3Q96MP5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.58■■■□□ 2.17
ZSWIM3Q96MP5 WASH5P-204ENST00000632292 975 ntBASIC28.58■■■□□ 2.17
ZSWIM3Q96MP5 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ZSWIM3Q96MP5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
ZSWIM3Q96MP5 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
ZSWIM3Q96MP5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.55■■■□□ 2.16
ZSWIM3Q96MP5 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ZSWIM3Q96MP5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ZSWIM3Q96MP5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
ZSWIM3Q96MP5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
ZSWIM3Q96MP5 AC044849.2-201ENST00000606596 710 ntBASIC28.52■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms