Protein–RNA interactions for Protein: Q96LT9

RNPC3, RNA-binding protein 40, humanhuman

Known RBP Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3Q96LT9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.27■■■□□ 2.6
RNPC3Q96LT9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.26■■■□□ 2.59
RNPC3Q96LT9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
RNPC3Q96LT9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
RNPC3Q96LT9 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.25■■■□□ 2.59
RNPC3Q96LT9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RNPC3Q96LT9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RNPC3Q96LT9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
RNPC3Q96LT9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.22■■■□□ 2.59
RNPC3Q96LT9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
RNPC3Q96LT9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
RNPC3Q96LT9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
RNPC3Q96LT9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
RNPC3Q96LT9 AL391121.1-201ENST00000607967 1349 ntBASIC31.2■■■□□ 2.58
RNPC3Q96LT9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RNPC3Q96LT9 ABHD17AP4-201ENST00000411545 909 ntBASIC31.18■■■□□ 2.58
RNPC3Q96LT9 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.14■■■□□ 2.58
RNPC3Q96LT9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.13■■■□□ 2.57
RNPC3Q96LT9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
RNPC3Q96LT9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
RNPC3Q96LT9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
RNPC3Q96LT9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
RNPC3Q96LT9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.1■■■□□ 2.57
RNPC3Q96LT9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
RNPC3Q96LT9 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.06■■■□□ 2.56
RNPC3Q96LT9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RNPC3Q96LT9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.04■■■□□ 2.56
RNPC3Q96LT9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RNPC3Q96LT9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
RNPC3Q96LT9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
RNPC3Q96LT9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.02■■■□□ 2.56
RNPC3Q96LT9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
RNPC3Q96LT9 MIR3665-201ENST00000578708 105 ntBASIC31.02■■■□□ 2.56
RNPC3Q96LT9 HLA-V-202ENST00000446817 847 ntBASIC31.01■■■□□ 2.55
RNPC3Q96LT9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31■■■□□ 2.55
RNPC3Q96LT9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RNPC3Q96LT9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.99■■■□□ 2.55
RNPC3Q96LT9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.98■■■□□ 2.55
RNPC3Q96LT9 AL133380.1-201ENST00000506013 324 ntBASIC30.95■■■□□ 2.55
RNPC3Q96LT9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
RNPC3Q96LT9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
RNPC3Q96LT9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RNPC3Q96LT9 AC145285.7-201ENST00000614819 1539 ntBASIC30.93■■■□□ 2.54
RNPC3Q96LT9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RNPC3Q96LT9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.91■■■□□ 2.54
RNPC3Q96LT9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.91■■■□□ 2.54
RNPC3Q96LT9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.91■■■□□ 2.54
RNPC3Q96LT9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.9■■■□□ 2.54
RNPC3Q96LT9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.89■■■□□ 2.54
RNPC3Q96LT9 AC087741.3-201ENST00000624270 1347 ntBASIC30.89■■■□□ 2.54
RNPC3Q96LT9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
RNPC3Q96LT9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
RNPC3Q96LT9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.86■■■□□ 2.53
RNPC3Q96LT9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
RNPC3Q96LT9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
RNPC3Q96LT9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
RNPC3Q96LT9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
RNPC3Q96LT9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.83■■■□□ 2.53
RNPC3Q96LT9 AC044849.2-201ENST00000606596 710 ntBASIC30.8■■■□□ 2.52
RNPC3Q96LT9 DUX4L28-201ENST00000623687 678 ntBASIC30.8■■■□□ 2.52
RNPC3Q96LT9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
RNPC3Q96LT9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
RNPC3Q96LT9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
RNPC3Q96LT9 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
RNPC3Q96LT9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
RNPC3Q96LT9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
RNPC3Q96LT9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.73■■■□□ 2.51
RNPC3Q96LT9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
RNPC3Q96LT9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.73■■■□□ 2.51
RNPC3Q96LT9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.73■■■□□ 2.51
RNPC3Q96LT9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.71■■■□□ 2.51
RNPC3Q96LT9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
RNPC3Q96LT9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
RNPC3Q96LT9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
RNPC3Q96LT9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
RNPC3Q96LT9 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.68■■■□□ 2.5
RNPC3Q96LT9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.65■■■□□ 2.5
RNPC3Q96LT9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.64■■■□□ 2.5
RNPC3Q96LT9 MIR762-201ENST00000390236 83 ntBASIC30.64■■■□□ 2.5
RNPC3Q96LT9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.64■■■□□ 2.5
RNPC3Q96LT9 AC005559.1-201ENST00000589661 871 ntBASIC30.63■■■□□ 2.49
RNPC3Q96LT9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.63■■■□□ 2.49
RNPC3Q96LT9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
RNPC3Q96LT9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.61■■■□□ 2.49
RNPC3Q96LT9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.61■■■□□ 2.49
RNPC3Q96LT9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RNPC3Q96LT9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RNPC3Q96LT9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RNPC3Q96LT9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.6■■■□□ 2.49
RNPC3Q96LT9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RNPC3Q96LT9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.59■■■□□ 2.49
RNPC3Q96LT9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.59■■■□□ 2.49
RNPC3Q96LT9 ZNRF2P2-203ENST00000454624 420 ntBASIC30.58■■■□□ 2.49
RNPC3Q96LT9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RNPC3Q96LT9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.57■■■□□ 2.48
RNPC3Q96LT9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.57■■■□□ 2.48
RNPC3Q96LT9 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
RNPC3Q96LT9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
RNPC3Q96LT9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
RNPC3Q96LT9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms