Protein–RNA interactions for Protein: Q96LT9

RNPC3, RNA-binding protein 40, humanhuman

Known RBP Predictions only

Length 517 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3Q96LT9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.27■■■□□ 2.6
RNPC3Q96LT9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.26■■■□□ 2.59
RNPC3Q96LT9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
RNPC3Q96LT9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
RNPC3Q96LT9 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.25■■■□□ 2.59
RNPC3Q96LT9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RNPC3Q96LT9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RNPC3Q96LT9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
RNPC3Q96LT9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.22■■■□□ 2.59
RNPC3Q96LT9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
RNPC3Q96LT9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
RNPC3Q96LT9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
RNPC3Q96LT9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
RNPC3Q96LT9 AL391121.1-201ENST00000607967 1349 ntBASIC31.2■■■□□ 2.58
RNPC3Q96LT9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RNPC3Q96LT9 ABHD17AP4-201ENST00000411545 909 ntBASIC31.18■■■□□ 2.58
RNPC3Q96LT9 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.14■■■□□ 2.58
RNPC3Q96LT9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.13■■■□□ 2.57
RNPC3Q96LT9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
RNPC3Q96LT9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
RNPC3Q96LT9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
RNPC3Q96LT9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
RNPC3Q96LT9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.1■■■□□ 2.57
RNPC3Q96LT9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
RNPC3Q96LT9 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.06■■■□□ 2.56
RNPC3Q96LT9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RNPC3Q96LT9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.04■■■□□ 2.56
RNPC3Q96LT9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RNPC3Q96LT9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
RNPC3Q96LT9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
RNPC3Q96LT9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.02■■■□□ 2.56
RNPC3Q96LT9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
RNPC3Q96LT9 MIR3665-201ENST00000578708 105 ntBASIC31.02■■■□□ 2.56
RNPC3Q96LT9 HLA-V-202ENST00000446817 847 ntBASIC31.01■■■□□ 2.55
RNPC3Q96LT9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31■■■□□ 2.55
RNPC3Q96LT9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RNPC3Q96LT9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.99■■■□□ 2.55
RNPC3Q96LT9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.98■■■□□ 2.55
RNPC3Q96LT9 AL133380.1-201ENST00000506013 324 ntBASIC30.95■■■□□ 2.55
RNPC3Q96LT9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
RNPC3Q96LT9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
RNPC3Q96LT9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RNPC3Q96LT9 AC145285.7-201ENST00000614819 1539 ntBASIC30.93■■■□□ 2.54
RNPC3Q96LT9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RNPC3Q96LT9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.91■■■□□ 2.54
RNPC3Q96LT9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.91■■■□□ 2.54
RNPC3Q96LT9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.91■■■□□ 2.54
RNPC3Q96LT9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.9■■■□□ 2.54
RNPC3Q96LT9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.89■■■□□ 2.54
RNPC3Q96LT9 AC087741.3-201ENST00000624270 1347 ntBASIC30.89■■■□□ 2.54
RNPC3Q96LT9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
RNPC3Q96LT9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
RNPC3Q96LT9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.86■■■□□ 2.53
RNPC3Q96LT9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
RNPC3Q96LT9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
RNPC3Q96LT9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
RNPC3Q96LT9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
RNPC3Q96LT9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.83■■■□□ 2.53
RNPC3Q96LT9 AC044849.2-201ENST00000606596 710 ntBASIC30.8■■■□□ 2.52
RNPC3Q96LT9 DUX4L28-201ENST00000623687 678 ntBASIC30.8■■■□□ 2.52
RNPC3Q96LT9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
RNPC3Q96LT9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
RNPC3Q96LT9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
RNPC3Q96LT9 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
RNPC3Q96LT9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
RNPC3Q96LT9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
RNPC3Q96LT9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.73■■■□□ 2.51
RNPC3Q96LT9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
RNPC3Q96LT9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.73■■■□□ 2.51
RNPC3Q96LT9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.73■■■□□ 2.51
RNPC3Q96LT9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.71■■■□□ 2.51
RNPC3Q96LT9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
RNPC3Q96LT9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
RNPC3Q96LT9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
RNPC3Q96LT9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
RNPC3Q96LT9 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.68■■■□□ 2.5
RNPC3Q96LT9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.65■■■□□ 2.5
RNPC3Q96LT9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.64■■■□□ 2.5
RNPC3Q96LT9 MIR762-201ENST00000390236 83 ntBASIC30.64■■■□□ 2.5
RNPC3Q96LT9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.64■■■□□ 2.5
RNPC3Q96LT9 AC005559.1-201ENST00000589661 871 ntBASIC30.63■■■□□ 2.49
RNPC3Q96LT9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.63■■■□□ 2.49
RNPC3Q96LT9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
RNPC3Q96LT9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.61■■■□□ 2.49
RNPC3Q96LT9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.61■■■□□ 2.49
RNPC3Q96LT9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RNPC3Q96LT9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RNPC3Q96LT9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RNPC3Q96LT9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.6■■■□□ 2.49
RNPC3Q96LT9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RNPC3Q96LT9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.59■■■□□ 2.49
RNPC3Q96LT9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.59■■■□□ 2.49
RNPC3Q96LT9 ZNRF2P2-203ENST00000454624 420 ntBASIC30.58■■■□□ 2.49
RNPC3Q96LT9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RNPC3Q96LT9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.57■■■□□ 2.48
RNPC3Q96LT9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.57■■■□□ 2.48
RNPC3Q96LT9 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
RNPC3Q96LT9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
RNPC3Q96LT9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
RNPC3Q96LT9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms