Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 MIR3665-201ENST00000578708 105 ntBASIC30.78■■■□□ 2.52
TIFAQ96CG3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.77■■■□□ 2.52
TIFAQ96CG3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.76■■■□□ 2.51
TIFAQ96CG3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
TIFAQ96CG3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.73■■■□□ 2.51
TIFAQ96CG3 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.73■■■□□ 2.51
TIFAQ96CG3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
TIFAQ96CG3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
TIFAQ96CG3 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
TIFAQ96CG3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
TIFAQ96CG3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TIFAQ96CG3 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.66■■■□□ 2.5
TIFAQ96CG3 AL133380.1-201ENST00000506013 324 ntBASIC30.66■■■□□ 2.5
TIFAQ96CG3 AC087741.3-201ENST00000624270 1347 ntBASIC30.65■■■□□ 2.5
TIFAQ96CG3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TIFAQ96CG3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.64■■■□□ 2.5
TIFAQ96CG3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.63■■■□□ 2.49
TIFAQ96CG3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TIFAQ96CG3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.62■■■□□ 2.49
TIFAQ96CG3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
TIFAQ96CG3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TIFAQ96CG3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TIFAQ96CG3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.59■■■□□ 2.49
TIFAQ96CG3 AC145285.7-201ENST00000614819 1539 ntBASIC30.58■■■□□ 2.49
TIFAQ96CG3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.55■■■□□ 2.48
TIFAQ96CG3 AC044849.2-201ENST00000606596 710 ntBASIC30.54■■■□□ 2.48
TIFAQ96CG3 DUX4L28-201ENST00000623687 678 ntBASIC30.54■■■□□ 2.48
TIFAQ96CG3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.54■■■□□ 2.48
TIFAQ96CG3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.52■■■□□ 2.48
TIFAQ96CG3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.51■■■□□ 2.47
TIFAQ96CG3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
TIFAQ96CG3 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
TIFAQ96CG3 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
TIFAQ96CG3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
TIFAQ96CG3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
TIFAQ96CG3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
TIFAQ96CG3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
TIFAQ96CG3 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.47■■■□□ 2.47
TIFAQ96CG3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.44■■■□□ 2.46
TIFAQ96CG3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.43■■■□□ 2.46
TIFAQ96CG3 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.43■■■□□ 2.46
TIFAQ96CG3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.4■■■□□ 2.46
TIFAQ96CG3 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
TIFAQ96CG3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.45
TIFAQ96CG3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
TIFAQ96CG3 MIR762-201ENST00000390236 83 ntBASIC30.37■■■□□ 2.45
TIFAQ96CG3 ZNRF2P2-203ENST00000454624 420 ntBASIC30.37■■■□□ 2.45
TIFAQ96CG3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.36■■■□□ 2.45
TIFAQ96CG3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.36■■■□□ 2.45
TIFAQ96CG3 AC005559.1-201ENST00000589661 871 ntBASIC30.35■■■□□ 2.45
TIFAQ96CG3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.35■■■□□ 2.45
TIFAQ96CG3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TIFAQ96CG3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.34■■■□□ 2.45
TIFAQ96CG3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TIFAQ96CG3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.33■■■□□ 2.45
TIFAQ96CG3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.33■■■□□ 2.45
TIFAQ96CG3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
TIFAQ96CG3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.32■■■□□ 2.44
TIFAQ96CG3 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
TIFAQ96CG3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
TIFAQ96CG3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
TIFAQ96CG3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.29■■■□□ 2.44
TIFAQ96CG3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TIFAQ96CG3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
TIFAQ96CG3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.25■■■□□ 2.43
TIFAQ96CG3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.24■■■□□ 2.43
TIFAQ96CG3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TIFAQ96CG3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.23■■■□□ 2.43
TIFAQ96CG3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
TIFAQ96CG3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
TIFAQ96CG3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
TIFAQ96CG3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
TIFAQ96CG3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.18■■■□□ 2.42
TIFAQ96CG3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.18■■■□□ 2.42
TIFAQ96CG3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
TIFAQ96CG3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
TIFAQ96CG3 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
TIFAQ96CG3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.15■■■□□ 2.42
TIFAQ96CG3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
TIFAQ96CG3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.13■■■□□ 2.41
TIFAQ96CG3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.12■■■□□ 2.41
TIFAQ96CG3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TIFAQ96CG3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.11■■■□□ 2.41
TIFAQ96CG3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.11■■■□□ 2.41
TIFAQ96CG3 MIR4449-201ENST00000578365 66 ntBASIC30.09■■■□□ 2.41
TIFAQ96CG3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
TIFAQ96CG3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
TIFAQ96CG3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
TIFAQ96CG3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
TIFAQ96CG3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
TIFAQ96CG3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.03■■■□□ 2.4
TIFAQ96CG3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
TIFAQ96CG3 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
TIFAQ96CG3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
TIFAQ96CG3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
TIFAQ96CG3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30■■■□□ 2.39
TIFAQ96CG3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.98■■■□□ 2.39
TIFAQ96CG3 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
TIFAQ96CG3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.97■■■□□ 2.39
TIFAQ96CG3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms