Protein–RNA interactions for Protein: Q92947

GCDH, Glutaryl-CoA dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCDHQ92947 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
GCDHQ92947 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
GCDHQ92947 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
GCDHQ92947 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
GCDHQ92947 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
GCDHQ92947 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
GCDHQ92947 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
GCDHQ92947 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC24.14■■□□□ 1.46
GCDHQ92947 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
GCDHQ92947 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
GCDHQ92947 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
GCDHQ92947 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
GCDHQ92947 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
GCDHQ92947 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
GCDHQ92947 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.1■■□□□ 1.45
GCDHQ92947 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
GCDHQ92947 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
GCDHQ92947 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
GCDHQ92947 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
GCDHQ92947 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
GCDHQ92947 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
GCDHQ92947 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
GCDHQ92947 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC24.04■■□□□ 1.44
GCDHQ92947 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC24.04■■□□□ 1.44
GCDHQ92947 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
GCDHQ92947 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
GCDHQ92947 ABCB10P1-201ENST00000614297 2181 ntBASIC24.03■■□□□ 1.44
GCDHQ92947 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
GCDHQ92947 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC24■■□□□ 1.43
GCDHQ92947 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
GCDHQ92947 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
GCDHQ92947 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
GCDHQ92947 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC23.99■■□□□ 1.43
GCDHQ92947 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
GCDHQ92947 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
GCDHQ92947 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
GCDHQ92947 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
GCDHQ92947 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
GCDHQ92947 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
GCDHQ92947 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
GCDHQ92947 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
GCDHQ92947 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.92■■□□□ 1.42
GCDHQ92947 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
GCDHQ92947 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
GCDHQ92947 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.91■■□□□ 1.42
GCDHQ92947 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
GCDHQ92947 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC23.89■■□□□ 1.41
GCDHQ92947 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
GCDHQ92947 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.88■■□□□ 1.41
GCDHQ92947 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
GCDHQ92947 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.86■■□□□ 1.41
GCDHQ92947 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
GCDHQ92947 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
GCDHQ92947 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
GCDHQ92947 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
GCDHQ92947 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
GCDHQ92947 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC23.84■■□□□ 1.41
GCDHQ92947 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
GCDHQ92947 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
GCDHQ92947 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.83■■□□□ 1.41
GCDHQ92947 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
GCDHQ92947 ABCB10P3-201ENST00000561950 2166 ntBASIC23.82■■□□□ 1.4
GCDHQ92947 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GCDHQ92947 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.81■■□□□ 1.4
GCDHQ92947 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GCDHQ92947 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GCDHQ92947 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC23.81■■□□□ 1.4
GCDHQ92947 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GCDHQ92947 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC23.8■■□□□ 1.4
GCDHQ92947 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GCDHQ92947 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
GCDHQ92947 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GCDHQ92947 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GCDHQ92947 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
GCDHQ92947 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GCDHQ92947 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GCDHQ92947 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GCDHQ92947 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
GCDHQ92947 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
GCDHQ92947 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
GCDHQ92947 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.75■■□□□ 1.39
GCDHQ92947 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
GCDHQ92947 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.75■■□□□ 1.39
GCDHQ92947 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
GCDHQ92947 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
GCDHQ92947 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
GCDHQ92947 AC139426.1-201ENST00000568218 2529 ntBASIC23.71■■□□□ 1.39
GCDHQ92947 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
GCDHQ92947 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.71■■□□□ 1.39
GCDHQ92947 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
GCDHQ92947 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.7■■□□□ 1.39
GCDHQ92947 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
GCDHQ92947 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
GCDHQ92947 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC23.69■■□□□ 1.38
GCDHQ92947 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
GCDHQ92947 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
GCDHQ92947 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.68■■□□□ 1.38
GCDHQ92947 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
GCDHQ92947 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
GCDHQ92947 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms