Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
SMARCC1Q92922 AL133380.1-201ENST00000506013 324 ntBASIC36.69■■■■□ 3.46
SMARCC1Q92922 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
SMARCC1Q92922 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC36.61■■■■□ 3.45
SMARCC1Q92922 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC36.61■■■■□ 3.45
SMARCC1Q92922 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
SMARCC1Q92922 HNRNPLP2-201ENST00000568980 1570 ntBASIC36.6■■■■□ 3.45
SMARCC1Q92922 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC36.59■■■■□ 3.45
SMARCC1Q92922 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC36.56■■■■□ 3.44
SMARCC1Q92922 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC36.56■■■■□ 3.44
SMARCC1Q92922 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC36.52■■■■□ 3.44
SMARCC1Q92922 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC36.51■■■■□ 3.44
SMARCC1Q92922 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC36.5■■■■□ 3.43
SMARCC1Q92922 EBPL-202ENST00000378268 680 ntTSL 3 BASIC36.48■■■■□ 3.43
SMARCC1Q92922 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC36.47■■■■□ 3.43
SMARCC1Q92922 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC36.47■■■■□ 3.43
SMARCC1Q92922 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
SMARCC1Q92922 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC36.45■■■■□ 3.43
SMARCC1Q92922 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC36.45■■■■□ 3.43
SMARCC1Q92922 MIR3665-201ENST00000578708 105 ntBASIC36.44■■■■□ 3.42
SMARCC1Q92922 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC36.43■■■■□ 3.42
SMARCC1Q92922 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC36.42■■■■□ 3.42
SMARCC1Q92922 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
SMARCC1Q92922 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
SMARCC1Q92922 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC36.4■■■■□ 3.42
SMARCC1Q92922 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC36.39■■■■□ 3.42
SMARCC1Q92922 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC36.39■■■■□ 3.42
SMARCC1Q92922 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC36.39■■■■□ 3.42
SMARCC1Q92922 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
SMARCC1Q92922 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC36.37■■■■□ 3.41
SMARCC1Q92922 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
SMARCC1Q92922 ABHD17AP4-201ENST00000411545 909 ntBASIC36.31■■■■□ 3.4
SMARCC1Q92922 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
SMARCC1Q92922 AC087741.3-201ENST00000624270 1347 ntBASIC36.27■■■■□ 3.4
SMARCC1Q92922 MIR7108-201ENST00000614319 87 ntBASIC36.26■■■■□ 3.4
SMARCC1Q92922 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
SMARCC1Q92922 MLEC-202ENST00000412616 841 ntTSL 3 BASIC36.22■■■■□ 3.39
SMARCC1Q92922 DUX4L28-201ENST00000623687 678 ntBASIC36.22■■■■□ 3.39
SMARCC1Q92922 CHML-205ENST00000638160 705 ntTSL 3 BASIC36.22■■■■□ 3.39
SMARCC1Q92922 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
SMARCC1Q92922 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC36.19■■■■□ 3.38
SMARCC1Q92922 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC36.18■■■■□ 3.38
SMARCC1Q92922 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC36.17■■■■□ 3.38
SMARCC1Q92922 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
SMARCC1Q92922 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC36.16■■■■□ 3.38
SMARCC1Q92922 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
SMARCC1Q92922 MIR762-201ENST00000390236 83 ntBASIC36.15■■■■□ 3.38
SMARCC1Q92922 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
SMARCC1Q92922 AC044849.2-201ENST00000606596 710 ntBASIC36.13■■■■□ 3.37
SMARCC1Q92922 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC36.12■■■■□ 3.37
SMARCC1Q92922 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC36.11■■■■□ 3.37
SMARCC1Q92922 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
SMARCC1Q92922 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC36.1■■■■□ 3.37
SMARCC1Q92922 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC36.08■■■■□ 3.37
SMARCC1Q92922 AC005559.1-201ENST00000589661 871 ntBASIC36.08■■■■□ 3.37
SMARCC1Q92922 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.37
SMARCC1Q92922 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
SMARCC1Q92922 PVT1-219ENST00000523427 938 ntTSL 3 BASIC36.05■■■■□ 3.36
SMARCC1Q92922 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
SMARCC1Q92922 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC36.04■■■■□ 3.36
SMARCC1Q92922 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
SMARCC1Q92922 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC36.04■■■■□ 3.36
SMARCC1Q92922 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC36.03■■■■□ 3.36
SMARCC1Q92922 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
SMARCC1Q92922 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC36■■■■□ 3.35
SMARCC1Q92922 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
SMARCC1Q92922 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC35.99■■■■□ 3.35
SMARCC1Q92922 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC35.97■■■■□ 3.35
SMARCC1Q92922 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC35.96■■■■□ 3.35
SMARCC1Q92922 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC35.95■■■■□ 3.35
SMARCC1Q92922 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC35.95■■■■□ 3.35
SMARCC1Q92922 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC35.95■■■■□ 3.35
SMARCC1Q92922 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
SMARCC1Q92922 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC35.93■■■■□ 3.34
SMARCC1Q92922 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
SMARCC1Q92922 DENR-202ENST00000455982 1052 ntTSL 5 BASIC35.91■■■■□ 3.34
SMARCC1Q92922 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC35.91■■■■□ 3.34
SMARCC1Q92922 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC35.91■■■■□ 3.34
SMARCC1Q92922 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC35.91■■■■□ 3.34
SMARCC1Q92922 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
SMARCC1Q92922 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
SMARCC1Q92922 HLA-V-202ENST00000446817 847 ntBASIC35.88■■■■□ 3.33
SMARCC1Q92922 MBP-237ENST00000579129 1052 ntTSL 5 BASIC35.88■■■■□ 3.33
SMARCC1Q92922 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
SMARCC1Q92922 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC35.86■■■■□ 3.33
SMARCC1Q92922 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC35.84■■■■□ 3.33
SMARCC1Q92922 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
SMARCC1Q92922 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC35.81■■■■□ 3.32
SMARCC1Q92922 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC35.81■■■■□ 3.32
SMARCC1Q92922 BOD1-206ENST00000480951 814 ntTSL 2 BASIC35.81■■■■□ 3.32
SMARCC1Q92922 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC35.79■■■■□ 3.32
SMARCC1Q92922 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
SMARCC1Q92922 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC35.78■■■■□ 3.32
SMARCC1Q92922 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
SMARCC1Q92922 ZNRF2P2-203ENST00000454624 420 ntBASIC35.76■■■■□ 3.32
SMARCC1Q92922 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC35.75■■■■□ 3.31
SMARCC1Q92922 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
SMARCC1Q92922 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC35.74■■■■□ 3.31
SMARCC1Q92922 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC35.74■■■■□ 3.31
SMARCC1Q92922 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC35.72■■■■□ 3.31
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms