Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.21■■■□□ 2.27
RNF139Q8WU17 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.17■■■□□ 2.26
RNF139Q8WU17 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
RNF139Q8WU17 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.16■■■□□ 2.26
RNF139Q8WU17 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
RNF139Q8WU17 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.25
RNF139Q8WU17 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
RNF139Q8WU17 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.11■■■□□ 2.25
RNF139Q8WU17 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.11■■■□□ 2.25
RNF139Q8WU17 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
RNF139Q8WU17 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
RNF139Q8WU17 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
RNF139Q8WU17 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.03■■■□□ 2.24
RNF139Q8WU17 SETD8P1-201ENST00000623146 1180 ntBASIC29.02■■■□□ 2.24
RNF139Q8WU17 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
RNF139Q8WU17 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.01■■■□□ 2.24
RNF139Q8WU17 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29■■■□□ 2.23
RNF139Q8WU17 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.99■■■□□ 2.23
RNF139Q8WU17 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RNF139Q8WU17 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RNF139Q8WU17 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.98■■■□□ 2.23
RNF139Q8WU17 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.98■■■□□ 2.23
RNF139Q8WU17 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
RNF139Q8WU17 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
RNF139Q8WU17 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
RNF139Q8WU17 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.94■■■□□ 2.22
RNF139Q8WU17 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.93■■■□□ 2.22
RNF139Q8WU17 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
RNF139Q8WU17 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.92■■■□□ 2.22
RNF139Q8WU17 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
RNF139Q8WU17 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
RNF139Q8WU17 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
RNF139Q8WU17 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
RNF139Q8WU17 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
RNF139Q8WU17 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.89■■■□□ 2.22
RNF139Q8WU17 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
RNF139Q8WU17 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
RNF139Q8WU17 AC097358.2-201ENST00000607541 1159 ntBASIC28.89■■■□□ 2.22
RNF139Q8WU17 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.88■■■□□ 2.21
RNF139Q8WU17 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
RNF139Q8WU17 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
RNF139Q8WU17 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.87■■■□□ 2.21
RNF139Q8WU17 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
RNF139Q8WU17 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
RNF139Q8WU17 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
RNF139Q8WU17 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.84■■■□□ 2.21
RNF139Q8WU17 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RNF139Q8WU17 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC28.83■■■□□ 2.21
RNF139Q8WU17 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
RNF139Q8WU17 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
RNF139Q8WU17 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RNF139Q8WU17 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
RNF139Q8WU17 AL133380.1-201ENST00000506013 324 ntBASIC28.8■■■□□ 2.2
RNF139Q8WU17 AC136428.2-201ENST00000563187 214 ntBASIC28.8■■■□□ 2.2
RNF139Q8WU17 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.78■■■□□ 2.2
RNF139Q8WU17 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.78■■■□□ 2.2
RNF139Q8WU17 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.77■■■□□ 2.2
RNF139Q8WU17 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
RNF139Q8WU17 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.76■■■□□ 2.19
RNF139Q8WU17 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RNF139Q8WU17 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.74■■■□□ 2.19
RNF139Q8WU17 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.73■■■□□ 2.19
RNF139Q8WU17 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
RNF139Q8WU17 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.72■■■□□ 2.19
RNF139Q8WU17 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC28.71■■■□□ 2.19
RNF139Q8WU17 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.71■■■□□ 2.19
RNF139Q8WU17 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
RNF139Q8WU17 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
RNF139Q8WU17 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
RNF139Q8WU17 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RNF139Q8WU17 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RNF139Q8WU17 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC28.68■■■□□ 2.18
RNF139Q8WU17 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.67■■■□□ 2.18
RNF139Q8WU17 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC28.67■■■□□ 2.18
RNF139Q8WU17 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.67■■■□□ 2.18
RNF139Q8WU17 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
RNF139Q8WU17 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
RNF139Q8WU17 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
RNF139Q8WU17 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
RNF139Q8WU17 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
RNF139Q8WU17 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.61■■■□□ 2.17
RNF139Q8WU17 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RNF139Q8WU17 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
RNF139Q8WU17 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RNF139Q8WU17 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
RNF139Q8WU17 CAHM-201ENST00000604200 896 ntBASIC28.57■■■□□ 2.16
RNF139Q8WU17 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.57■■■□□ 2.16
RNF139Q8WU17 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
RNF139Q8WU17 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
RNF139Q8WU17 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.56■■■□□ 2.16
RNF139Q8WU17 AL391121.1-201ENST00000607967 1349 ntBASIC28.55■■■□□ 2.16
RNF139Q8WU17 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.55■■■□□ 2.16
RNF139Q8WU17 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
RNF139Q8WU17 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF139Q8WU17 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF139Q8WU17 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
RNF139Q8WU17 SUZ12P1-203ENST00000578195 985 ntBASIC28.52■■■□□ 2.16
RNF139Q8WU17 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
RNF139Q8WU17 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RNF139Q8WU17 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms