Protein–RNA interactions for Protein: Q8TD19

NEK9, Serine/threonine-protein kinase Nek9, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9Q8TD19 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NEK9Q8TD19 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NEK9Q8TD19 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.3■■■□□ 2.6
NEK9Q8TD19 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.29■■■□□ 2.6
NEK9Q8TD19 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NEK9Q8TD19 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.28■■■□□ 2.6
NEK9Q8TD19 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NEK9Q8TD19 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NEK9Q8TD19 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
NEK9Q8TD19 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NEK9Q8TD19 RARRES2P7-201ENST00000567349 469 ntBASIC31.24■■■□□ 2.59
NEK9Q8TD19 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.22■■■□□ 2.59
NEK9Q8TD19 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NEK9Q8TD19 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
NEK9Q8TD19 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
NEK9Q8TD19 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
NEK9Q8TD19 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.12■■■□□ 2.57
NEK9Q8TD19 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.12■■■□□ 2.57
NEK9Q8TD19 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
NEK9Q8TD19 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NEK9Q8TD19 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.11■■■□□ 2.57
NEK9Q8TD19 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
NEK9Q8TD19 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.09■■■□□ 2.57
NEK9Q8TD19 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.09■■■□□ 2.57
NEK9Q8TD19 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
NEK9Q8TD19 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
NEK9Q8TD19 AC097358.2-201ENST00000607541 1159 ntBASIC31.07■■■□□ 2.56
NEK9Q8TD19 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.06■■■□□ 2.56
NEK9Q8TD19 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
NEK9Q8TD19 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.05■■■□□ 2.56
NEK9Q8TD19 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
NEK9Q8TD19 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31■■■□□ 2.55
NEK9Q8TD19 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
NEK9Q8TD19 RPS2P35-201ENST00000443417 897 ntBASIC30.99■■■□□ 2.55
NEK9Q8TD19 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
NEK9Q8TD19 AC136428.2-201ENST00000563187 214 ntBASIC30.98■■■□□ 2.55
NEK9Q8TD19 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.98■■■□□ 2.55
NEK9Q8TD19 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
NEK9Q8TD19 SETD8P1-201ENST00000623146 1180 ntBASIC30.97■■■□□ 2.55
NEK9Q8TD19 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
NEK9Q8TD19 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
NEK9Q8TD19 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.54
NEK9Q8TD19 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
NEK9Q8TD19 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
NEK9Q8TD19 SUZ12P1-203ENST00000578195 985 ntBASIC30.93■■■□□ 2.54
NEK9Q8TD19 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.92■■■□□ 2.54
NEK9Q8TD19 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
NEK9Q8TD19 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
NEK9Q8TD19 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
NEK9Q8TD19 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
NEK9Q8TD19 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
NEK9Q8TD19 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.89■■■□□ 2.54
NEK9Q8TD19 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
NEK9Q8TD19 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
NEK9Q8TD19 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.88■■■□□ 2.53
NEK9Q8TD19 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.87■■■□□ 2.53
NEK9Q8TD19 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
NEK9Q8TD19 AL133380.1-201ENST00000506013 324 ntBASIC30.86■■■□□ 2.53
NEK9Q8TD19 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
NEK9Q8TD19 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.86■■■□□ 2.53
NEK9Q8TD19 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
NEK9Q8TD19 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
NEK9Q8TD19 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
NEK9Q8TD19 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
NEK9Q8TD19 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
NEK9Q8TD19 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.8■■■□□ 2.52
NEK9Q8TD19 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
NEK9Q8TD19 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.78■■■□□ 2.52
NEK9Q8TD19 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.77■■■□□ 2.52
NEK9Q8TD19 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
NEK9Q8TD19 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
NEK9Q8TD19 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
NEK9Q8TD19 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
NEK9Q8TD19 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
NEK9Q8TD19 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
NEK9Q8TD19 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
NEK9Q8TD19 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.71■■■□□ 2.51
NEK9Q8TD19 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
NEK9Q8TD19 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NEK9Q8TD19 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NEK9Q8TD19 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NEK9Q8TD19 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.68■■■□□ 2.5
NEK9Q8TD19 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NEK9Q8TD19 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
NEK9Q8TD19 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
NEK9Q8TD19 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.66■■■□□ 2.5
NEK9Q8TD19 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.63■■■□□ 2.49
NEK9Q8TD19 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
NEK9Q8TD19 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.63■■■□□ 2.49
NEK9Q8TD19 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
NEK9Q8TD19 AC120057.4-201ENST00000624722 1615 ntBASIC30.62■■■□□ 2.49
NEK9Q8TD19 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NEK9Q8TD19 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
NEK9Q8TD19 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
NEK9Q8TD19 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.59■■■□□ 2.49
NEK9Q8TD19 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
NEK9Q8TD19 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.55■■■□□ 2.48
NEK9Q8TD19 AL391121.1-201ENST00000607967 1349 ntBASIC30.54■■■□□ 2.48
NEK9Q8TD19 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
NEK9Q8TD19 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms