Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
SMARCC2Q8TAQ2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
SMARCC2Q8TAQ2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.65■■■□□ 2.82
SMARCC2Q8TAQ2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.65■■■□□ 2.82
SMARCC2Q8TAQ2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
SMARCC2Q8TAQ2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC32.64■■■□□ 2.82
SMARCC2Q8TAQ2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC32.63■■■□□ 2.81
SMARCC2Q8TAQ2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32.61■■■□□ 2.81
SMARCC2Q8TAQ2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.61■■■□□ 2.81
SMARCC2Q8TAQ2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC32.61■■■□□ 2.81
SMARCC2Q8TAQ2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC32.61■■■□□ 2.81
SMARCC2Q8TAQ2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.6■■■□□ 2.81
SMARCC2Q8TAQ2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.59■■■□□ 2.81
SMARCC2Q8TAQ2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
SMARCC2Q8TAQ2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.56■■■□□ 2.8
SMARCC2Q8TAQ2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.55■■■□□ 2.8
SMARCC2Q8TAQ2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
SMARCC2Q8TAQ2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.54■■■□□ 2.8
SMARCC2Q8TAQ2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
SMARCC2Q8TAQ2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SMARCC2Q8TAQ2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SMARCC2Q8TAQ2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
SMARCC2Q8TAQ2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC32.51■■■□□ 2.8
SMARCC2Q8TAQ2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
SMARCC2Q8TAQ2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SMARCC2Q8TAQ2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC32.5■■■□□ 2.79
SMARCC2Q8TAQ2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.49■■■□□ 2.79
SMARCC2Q8TAQ2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32.49■■■□□ 2.79
SMARCC2Q8TAQ2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
SMARCC2Q8TAQ2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC32.47■■■□□ 2.79
SMARCC2Q8TAQ2 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.46■■■□□ 2.79
SMARCC2Q8TAQ2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SMARCC2Q8TAQ2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.46■■■□□ 2.79
SMARCC2Q8TAQ2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.43■■■□□ 2.78
SMARCC2Q8TAQ2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
SMARCC2Q8TAQ2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
SMARCC2Q8TAQ2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
SMARCC2Q8TAQ2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC32.41■■■□□ 2.78
SMARCC2Q8TAQ2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
SMARCC2Q8TAQ2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.4■■■□□ 2.78
SMARCC2Q8TAQ2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC32.4■■■□□ 2.78
SMARCC2Q8TAQ2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
SMARCC2Q8TAQ2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC32.39■■■□□ 2.78
SMARCC2Q8TAQ2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC32.39■■■□□ 2.78
SMARCC2Q8TAQ2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
SMARCC2Q8TAQ2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
SMARCC2Q8TAQ2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.35■■■□□ 2.77
SMARCC2Q8TAQ2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
SMARCC2Q8TAQ2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
SMARCC2Q8TAQ2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
SMARCC2Q8TAQ2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
SMARCC2Q8TAQ2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC32.32■■■□□ 2.76
SMARCC2Q8TAQ2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SMARCC2Q8TAQ2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
SMARCC2Q8TAQ2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
SMARCC2Q8TAQ2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
SMARCC2Q8TAQ2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.27■■■□□ 2.76
SMARCC2Q8TAQ2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC32.27■■■□□ 2.76
SMARCC2Q8TAQ2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
SMARCC2Q8TAQ2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.25■■■□□ 2.75
SMARCC2Q8TAQ2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.24■■■□□ 2.75
SMARCC2Q8TAQ2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
SMARCC2Q8TAQ2 AC120057.4-201ENST00000624722 1615 ntBASIC32.22■■■□□ 2.75
SMARCC2Q8TAQ2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
SMARCC2Q8TAQ2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.22■■■□□ 2.75
SMARCC2Q8TAQ2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.21■■■□□ 2.75
SMARCC2Q8TAQ2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.2■■■□□ 2.75
SMARCC2Q8TAQ2 RARRES2P7-201ENST00000567349 469 ntBASIC32.2■■■□□ 2.75
SMARCC2Q8TAQ2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.19■■■□□ 2.74
SMARCC2Q8TAQ2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SMARCC2Q8TAQ2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.18■■■□□ 2.74
SMARCC2Q8TAQ2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
SMARCC2Q8TAQ2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
SMARCC2Q8TAQ2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.18■■■□□ 2.74
SMARCC2Q8TAQ2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.17■■■□□ 2.74
SMARCC2Q8TAQ2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SMARCC2Q8TAQ2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC32.16■■■□□ 2.74
SMARCC2Q8TAQ2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
SMARCC2Q8TAQ2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.15■■■□□ 2.74
SMARCC2Q8TAQ2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.73
SMARCC2Q8TAQ2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
SMARCC2Q8TAQ2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.11■■■□□ 2.73
SMARCC2Q8TAQ2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
SMARCC2Q8TAQ2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
SMARCC2Q8TAQ2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
SMARCC2Q8TAQ2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.06■■■□□ 2.72
SMARCC2Q8TAQ2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
SMARCC2Q8TAQ2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
SMARCC2Q8TAQ2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.04■■■□□ 2.72
SMARCC2Q8TAQ2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
SMARCC2Q8TAQ2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
SMARCC2Q8TAQ2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
SMARCC2Q8TAQ2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
SMARCC2Q8TAQ2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32■■■□□ 2.71
SMARCC2Q8TAQ2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
SMARCC2Q8TAQ2 SETD8P1-201ENST00000623146 1180 ntBASIC31.98■■■□□ 2.71
SMARCC2Q8TAQ2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
SMARCC2Q8TAQ2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
SMARCC2Q8TAQ2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SMARCC2Q8TAQ2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms