Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.81■■□□□ 1.88
SNIP1Q8TAD8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.8■■□□□ 1.88
SNIP1Q8TAD8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
SNIP1Q8TAD8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.79■■□□□ 1.88
SNIP1Q8TAD8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
SNIP1Q8TAD8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
SNIP1Q8TAD8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNIP1Q8TAD8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.77■■□□□ 1.88
SNIP1Q8TAD8 MIR3665-201ENST00000578708 105 ntBASIC26.77■■□□□ 1.88
SNIP1Q8TAD8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNIP1Q8TAD8 AL133380.1-201ENST00000506013 324 ntBASIC26.76■■□□□ 1.87
SNIP1Q8TAD8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.75■■□□□ 1.87
SNIP1Q8TAD8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SNIP1Q8TAD8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
SNIP1Q8TAD8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNIP1Q8TAD8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.73■■□□□ 1.87
SNIP1Q8TAD8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNIP1Q8TAD8 AC145285.7-201ENST00000614819 1539 ntBASIC26.72■■□□□ 1.87
SNIP1Q8TAD8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.72■■□□□ 1.87
SNIP1Q8TAD8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.68■■□□□ 1.86
SNIP1Q8TAD8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.67■■□□□ 1.86
SNIP1Q8TAD8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SNIP1Q8TAD8 AC087741.3-201ENST00000624270 1347 ntBASIC26.65■■□□□ 1.86
SNIP1Q8TAD8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SNIP1Q8TAD8 HLA-V-202ENST00000446817 847 ntBASIC26.61■■□□□ 1.85
SNIP1Q8TAD8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SNIP1Q8TAD8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.6■■□□□ 1.85
SNIP1Q8TAD8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.6■■□□□ 1.85
SNIP1Q8TAD8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SNIP1Q8TAD8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.59■■□□□ 1.85
SNIP1Q8TAD8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
SNIP1Q8TAD8 AC044849.2-201ENST00000606596 710 ntBASIC26.57■■□□□ 1.84
SNIP1Q8TAD8 DUX4L28-201ENST00000623687 678 ntBASIC26.57■■□□□ 1.84
SNIP1Q8TAD8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SNIP1Q8TAD8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
SNIP1Q8TAD8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNIP1Q8TAD8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.54■■□□□ 1.84
SNIP1Q8TAD8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SNIP1Q8TAD8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.53■■□□□ 1.84
SNIP1Q8TAD8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
SNIP1Q8TAD8 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.51■■□□□ 1.83
SNIP1Q8TAD8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.5■■□□□ 1.83
SNIP1Q8TAD8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.48■■□□□ 1.83
SNIP1Q8TAD8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.47■■□□□ 1.83
SNIP1Q8TAD8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.47■■□□□ 1.83
SNIP1Q8TAD8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
SNIP1Q8TAD8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.44■■□□□ 1.82
SNIP1Q8TAD8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
SNIP1Q8TAD8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
SNIP1Q8TAD8 MIR762-201ENST00000390236 83 ntBASIC26.43■■□□□ 1.82
SNIP1Q8TAD8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNIP1Q8TAD8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNIP1Q8TAD8 AC005559.1-201ENST00000589661 871 ntBASIC26.41■■□□□ 1.82
SNIP1Q8TAD8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.41■■□□□ 1.82
SNIP1Q8TAD8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.41■■□□□ 1.82
SNIP1Q8TAD8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNIP1Q8TAD8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNIP1Q8TAD8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.37■■□□□ 1.81
SNIP1Q8TAD8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.37■■□□□ 1.81
SNIP1Q8TAD8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.37■■□□□ 1.81
SNIP1Q8TAD8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SNIP1Q8TAD8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.36■■□□□ 1.81
SNIP1Q8TAD8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.36■■□□□ 1.81
SNIP1Q8TAD8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SNIP1Q8TAD8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SNIP1Q8TAD8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SNIP1Q8TAD8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SNIP1Q8TAD8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.34■■□□□ 1.81
SNIP1Q8TAD8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.34■■□□□ 1.81
SNIP1Q8TAD8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SNIP1Q8TAD8 ZNRF2P2-203ENST00000454624 420 ntBASIC26.33■■□□□ 1.81
SNIP1Q8TAD8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SNIP1Q8TAD8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNIP1Q8TAD8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.32■■□□□ 1.8
SNIP1Q8TAD8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.32■■□□□ 1.8
SNIP1Q8TAD8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SNIP1Q8TAD8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.29■■□□□ 1.8
SNIP1Q8TAD8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNIP1Q8TAD8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.28■■□□□ 1.8
SNIP1Q8TAD8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SNIP1Q8TAD8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SNIP1Q8TAD8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SNIP1Q8TAD8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SNIP1Q8TAD8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.2■■□□□ 1.78
SNIP1Q8TAD8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SNIP1Q8TAD8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNIP1Q8TAD8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
SNIP1Q8TAD8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.18■■□□□ 1.78
SNIP1Q8TAD8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
SNIP1Q8TAD8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.16■■□□□ 1.78
SNIP1Q8TAD8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNIP1Q8TAD8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.14■■□□□ 1.78
SNIP1Q8TAD8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
SNIP1Q8TAD8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.14■■□□□ 1.77
SNIP1Q8TAD8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNIP1Q8TAD8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNIP1Q8TAD8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNIP1Q8TAD8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.11■■□□□ 1.77
SNIP1Q8TAD8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNIP1Q8TAD8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms