Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.81■■□□□ 1.88
SNIP1Q8TAD8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.8■■□□□ 1.88
SNIP1Q8TAD8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
SNIP1Q8TAD8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.79■■□□□ 1.88
SNIP1Q8TAD8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
SNIP1Q8TAD8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
SNIP1Q8TAD8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNIP1Q8TAD8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.77■■□□□ 1.88
SNIP1Q8TAD8 MIR3665-201ENST00000578708 105 ntBASIC26.77■■□□□ 1.88
SNIP1Q8TAD8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNIP1Q8TAD8 AL133380.1-201ENST00000506013 324 ntBASIC26.76■■□□□ 1.87
SNIP1Q8TAD8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.75■■□□□ 1.87
SNIP1Q8TAD8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SNIP1Q8TAD8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
SNIP1Q8TAD8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNIP1Q8TAD8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.73■■□□□ 1.87
SNIP1Q8TAD8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNIP1Q8TAD8 AC145285.7-201ENST00000614819 1539 ntBASIC26.72■■□□□ 1.87
SNIP1Q8TAD8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.72■■□□□ 1.87
SNIP1Q8TAD8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.68■■□□□ 1.86
SNIP1Q8TAD8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.67■■□□□ 1.86
SNIP1Q8TAD8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SNIP1Q8TAD8 AC087741.3-201ENST00000624270 1347 ntBASIC26.65■■□□□ 1.86
SNIP1Q8TAD8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SNIP1Q8TAD8 HLA-V-202ENST00000446817 847 ntBASIC26.61■■□□□ 1.85
SNIP1Q8TAD8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SNIP1Q8TAD8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.6■■□□□ 1.85
SNIP1Q8TAD8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.6■■□□□ 1.85
SNIP1Q8TAD8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SNIP1Q8TAD8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.59■■□□□ 1.85
SNIP1Q8TAD8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
SNIP1Q8TAD8 AC044849.2-201ENST00000606596 710 ntBASIC26.57■■□□□ 1.84
SNIP1Q8TAD8 DUX4L28-201ENST00000623687 678 ntBASIC26.57■■□□□ 1.84
SNIP1Q8TAD8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SNIP1Q8TAD8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
SNIP1Q8TAD8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNIP1Q8TAD8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.54■■□□□ 1.84
SNIP1Q8TAD8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SNIP1Q8TAD8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.53■■□□□ 1.84
SNIP1Q8TAD8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
SNIP1Q8TAD8 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.51■■□□□ 1.83
SNIP1Q8TAD8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.5■■□□□ 1.83
SNIP1Q8TAD8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.48■■□□□ 1.83
SNIP1Q8TAD8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.47■■□□□ 1.83
SNIP1Q8TAD8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.47■■□□□ 1.83
SNIP1Q8TAD8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
SNIP1Q8TAD8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.44■■□□□ 1.82
SNIP1Q8TAD8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
SNIP1Q8TAD8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
SNIP1Q8TAD8 MIR762-201ENST00000390236 83 ntBASIC26.43■■□□□ 1.82
SNIP1Q8TAD8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNIP1Q8TAD8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNIP1Q8TAD8 AC005559.1-201ENST00000589661 871 ntBASIC26.41■■□□□ 1.82
SNIP1Q8TAD8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.41■■□□□ 1.82
SNIP1Q8TAD8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.41■■□□□ 1.82
SNIP1Q8TAD8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNIP1Q8TAD8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNIP1Q8TAD8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.37■■□□□ 1.81
SNIP1Q8TAD8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.37■■□□□ 1.81
SNIP1Q8TAD8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.37■■□□□ 1.81
SNIP1Q8TAD8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SNIP1Q8TAD8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.36■■□□□ 1.81
SNIP1Q8TAD8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.36■■□□□ 1.81
SNIP1Q8TAD8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SNIP1Q8TAD8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SNIP1Q8TAD8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SNIP1Q8TAD8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SNIP1Q8TAD8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.34■■□□□ 1.81
SNIP1Q8TAD8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.34■■□□□ 1.81
SNIP1Q8TAD8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SNIP1Q8TAD8 ZNRF2P2-203ENST00000454624 420 ntBASIC26.33■■□□□ 1.81
SNIP1Q8TAD8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SNIP1Q8TAD8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNIP1Q8TAD8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.32■■□□□ 1.8
SNIP1Q8TAD8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.32■■□□□ 1.8
SNIP1Q8TAD8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SNIP1Q8TAD8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.29■■□□□ 1.8
SNIP1Q8TAD8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNIP1Q8TAD8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.28■■□□□ 1.8
SNIP1Q8TAD8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SNIP1Q8TAD8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SNIP1Q8TAD8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SNIP1Q8TAD8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SNIP1Q8TAD8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.2■■□□□ 1.78
SNIP1Q8TAD8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SNIP1Q8TAD8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNIP1Q8TAD8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
SNIP1Q8TAD8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.18■■□□□ 1.78
SNIP1Q8TAD8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
SNIP1Q8TAD8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.16■■□□□ 1.78
SNIP1Q8TAD8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNIP1Q8TAD8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.14■■□□□ 1.78
SNIP1Q8TAD8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
SNIP1Q8TAD8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.14■■□□□ 1.77
SNIP1Q8TAD8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNIP1Q8TAD8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNIP1Q8TAD8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNIP1Q8TAD8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.11■■□□□ 1.77
SNIP1Q8TAD8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNIP1Q8TAD8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms