Protein–RNA interactions for Protein: Q8N9V2

TRIML1, Probable E3 ubiquitin-protein ligase TRIML1, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML1Q8N9V2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.06■■■□□ 2.56
TRIML1Q8N9V2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TRIML1Q8N9V2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
TRIML1Q8N9V2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TRIML1Q8N9V2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.02■■■□□ 2.56
TRIML1Q8N9V2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
TRIML1Q8N9V2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.01■■■□□ 2.56
TRIML1Q8N9V2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
TRIML1Q8N9V2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
TRIML1Q8N9V2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
TRIML1Q8N9V2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
TRIML1Q8N9V2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TRIML1Q8N9V2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TRIML1Q8N9V2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
TRIML1Q8N9V2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
TRIML1Q8N9V2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
TRIML1Q8N9V2 ZNRF2P1-201ENST00000441407 443 ntBASIC30.97■■■□□ 2.55
TRIML1Q8N9V2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
TRIML1Q8N9V2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.96■■■□□ 2.55
TRIML1Q8N9V2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
TRIML1Q8N9V2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
TRIML1Q8N9V2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.94■■■□□ 2.54
TRIML1Q8N9V2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.94■■■□□ 2.54
TRIML1Q8N9V2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TRIML1Q8N9V2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
TRIML1Q8N9V2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
TRIML1Q8N9V2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.92■■■□□ 2.54
TRIML1Q8N9V2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.91■■■□□ 2.54
TRIML1Q8N9V2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.91■■■□□ 2.54
TRIML1Q8N9V2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.9■■■□□ 2.54
TRIML1Q8N9V2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
TRIML1Q8N9V2 AC120057.4-201ENST00000624722 1615 ntBASIC30.9■■■□□ 2.54
TRIML1Q8N9V2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.53
TRIML1Q8N9V2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
TRIML1Q8N9V2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.88■■■□□ 2.53
TRIML1Q8N9V2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
TRIML1Q8N9V2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
TRIML1Q8N9V2 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.87■■■□□ 2.53
TRIML1Q8N9V2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
TRIML1Q8N9V2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
TRIML1Q8N9V2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TRIML1Q8N9V2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.82■■■□□ 2.52
TRIML1Q8N9V2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
TRIML1Q8N9V2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
TRIML1Q8N9V2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
TRIML1Q8N9V2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.79■■■□□ 2.52
TRIML1Q8N9V2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
TRIML1Q8N9V2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
TRIML1Q8N9V2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
TRIML1Q8N9V2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.75■■■□□ 2.51
TRIML1Q8N9V2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
TRIML1Q8N9V2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.72■■■□□ 2.51
TRIML1Q8N9V2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.71■■■□□ 2.51
TRIML1Q8N9V2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
TRIML1Q8N9V2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TRIML1Q8N9V2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIML1Q8N9V2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIML1Q8N9V2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.68■■■□□ 2.5
TRIML1Q8N9V2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TRIML1Q8N9V2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TRIML1Q8N9V2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.65■■■□□ 2.5
TRIML1Q8N9V2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TRIML1Q8N9V2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.62■■■□□ 2.49
TRIML1Q8N9V2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRIML1Q8N9V2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TRIML1Q8N9V2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
TRIML1Q8N9V2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.58■■■□□ 2.49
TRIML1Q8N9V2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TRIML1Q8N9V2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
TRIML1Q8N9V2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
TRIML1Q8N9V2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
TRIML1Q8N9V2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
TRIML1Q8N9V2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
TRIML1Q8N9V2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TRIML1Q8N9V2 DYNLL1-208ENST00000550178 581 ntBASIC30.53■■■□□ 2.48
TRIML1Q8N9V2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TRIML1Q8N9V2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.52■■■□□ 2.48
TRIML1Q8N9V2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.52■■■□□ 2.48
TRIML1Q8N9V2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TRIML1Q8N9V2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
TRIML1Q8N9V2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.5■■■□□ 2.47
TRIML1Q8N9V2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TRIML1Q8N9V2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
TRIML1Q8N9V2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.49■■■□□ 2.47
TRIML1Q8N9V2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
TRIML1Q8N9V2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
TRIML1Q8N9V2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.43■■■□□ 2.46
TRIML1Q8N9V2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
TRIML1Q8N9V2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
TRIML1Q8N9V2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.42■■■□□ 2.46
TRIML1Q8N9V2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
TRIML1Q8N9V2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
TRIML1Q8N9V2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
TRIML1Q8N9V2 ABCB10P1-201ENST00000614297 2181 ntBASIC30.38■■■□□ 2.45
TRIML1Q8N9V2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
TRIML1Q8N9V2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
TRIML1Q8N9V2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.36■■■□□ 2.45
TRIML1Q8N9V2 AL031258.1-201ENST00000623562 325 ntBASIC30.36■■■□□ 2.45
TRIML1Q8N9V2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
TRIML1Q8N9V2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms