Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 SETD8P1-201ENST00000623146 1180 ntBASIC28.29■■■□□ 2.12
PCDH20Q8N6Y1 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDH20Q8N6Y1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDH20Q8N6Y1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PCDH20Q8N6Y1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.25■■■□□ 2.11
PCDH20Q8N6Y1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PCDH20Q8N6Y1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PCDH20Q8N6Y1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PCDH20Q8N6Y1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
PCDH20Q8N6Y1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.22■■■□□ 2.11
PCDH20Q8N6Y1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
PCDH20Q8N6Y1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.2■■■□□ 2.11
PCDH20Q8N6Y1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.2■■■□□ 2.1
PCDH20Q8N6Y1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
PCDH20Q8N6Y1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.19■■■□□ 2.1
PCDH20Q8N6Y1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.18■■■□□ 2.1
PCDH20Q8N6Y1 AC097358.2-201ENST00000607541 1159 ntBASIC28.17■■■□□ 2.1
PCDH20Q8N6Y1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC28.17■■■□□ 2.1
PCDH20Q8N6Y1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.16■■■□□ 2.1
PCDH20Q8N6Y1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDH20Q8N6Y1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
PCDH20Q8N6Y1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDH20Q8N6Y1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.14■■■□□ 2.09
PCDH20Q8N6Y1 AC136428.2-201ENST00000563187 214 ntBASIC28.13■■■□□ 2.09
PCDH20Q8N6Y1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PCDH20Q8N6Y1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
PCDH20Q8N6Y1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDH20Q8N6Y1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.11■■■□□ 2.09
PCDH20Q8N6Y1 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDH20Q8N6Y1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDH20Q8N6Y1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDH20Q8N6Y1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
PCDH20Q8N6Y1 AL133380.1-201ENST00000506013 324 ntBASIC28.07■■■□□ 2.08
PCDH20Q8N6Y1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
PCDH20Q8N6Y1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PCDH20Q8N6Y1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
PCDH20Q8N6Y1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.05■■■□□ 2.08
PCDH20Q8N6Y1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PCDH20Q8N6Y1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PCDH20Q8N6Y1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PCDH20Q8N6Y1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.02■■■□□ 2.08
PCDH20Q8N6Y1 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PCDH20Q8N6Y1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PCDH20Q8N6Y1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28■■■□□ 2.07
PCDH20Q8N6Y1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.99■■■□□ 2.07
PCDH20Q8N6Y1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.99■■■□□ 2.07
PCDH20Q8N6Y1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PCDH20Q8N6Y1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.98■■■□□ 2.07
PCDH20Q8N6Y1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PCDH20Q8N6Y1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
PCDH20Q8N6Y1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PCDH20Q8N6Y1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.96■■■□□ 2.07
PCDH20Q8N6Y1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PCDH20Q8N6Y1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.07
PCDH20Q8N6Y1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
PCDH20Q8N6Y1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.94■■■□□ 2.06
PCDH20Q8N6Y1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
PCDH20Q8N6Y1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.93■■■□□ 2.06
PCDH20Q8N6Y1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
PCDH20Q8N6Y1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.92■■■□□ 2.06
PCDH20Q8N6Y1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
PCDH20Q8N6Y1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PCDH20Q8N6Y1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.06
PCDH20Q8N6Y1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.88■■■□□ 2.05
PCDH20Q8N6Y1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.88■■■□□ 2.05
PCDH20Q8N6Y1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
PCDH20Q8N6Y1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
PCDH20Q8N6Y1 CAHM-201ENST00000604200 896 ntBASIC27.88■■■□□ 2.05
PCDH20Q8N6Y1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.88■■■□□ 2.05
PCDH20Q8N6Y1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.87■■■□□ 2.05
PCDH20Q8N6Y1 SUZ12P1-203ENST00000578195 985 ntBASIC27.87■■■□□ 2.05
PCDH20Q8N6Y1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
PCDH20Q8N6Y1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.87■■■□□ 2.05
PCDH20Q8N6Y1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.86■■■□□ 2.05
PCDH20Q8N6Y1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PCDH20Q8N6Y1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PCDH20Q8N6Y1 AL391121.1-201ENST00000607967 1349 ntBASIC27.85■■■□□ 2.05
PCDH20Q8N6Y1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.83■■■□□ 2.05
PCDH20Q8N6Y1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.83■■■□□ 2.05
PCDH20Q8N6Y1 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
PCDH20Q8N6Y1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.81■■■□□ 2.04
PCDH20Q8N6Y1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PCDH20Q8N6Y1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PCDH20Q8N6Y1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
PCDH20Q8N6Y1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
PCDH20Q8N6Y1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PCDH20Q8N6Y1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.78■■■□□ 2.04
PCDH20Q8N6Y1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PCDH20Q8N6Y1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.78■■■□□ 2.04
PCDH20Q8N6Y1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PCDH20Q8N6Y1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PCDH20Q8N6Y1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
PCDH20Q8N6Y1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PCDH20Q8N6Y1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.74■■■□□ 2.03
PCDH20Q8N6Y1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.74■■■□□ 2.03
PCDH20Q8N6Y1 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.74■■■□□ 2.03
PCDH20Q8N6Y1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCDH20Q8N6Y1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCDH20Q8N6Y1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC27.73■■■□□ 2.03
PCDH20Q8N6Y1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms