Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC40.11■■■■■ 4.01
XRN1Q8IZH2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC40.1■■■■■ 4.01
XRN1Q8IZH2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC40.09■■■■■ 4.01
XRN1Q8IZH2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC40.08■■■■■ 4.01
XRN1Q8IZH2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC40.03■■■■■ 4
XRN1Q8IZH2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC40.03■■■■■ 4
XRN1Q8IZH2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC40.03■■■■■ 4
XRN1Q8IZH2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC40.02■■■■■ 4
XRN1Q8IZH2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC40.01■■■■■ 4
XRN1Q8IZH2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC40.01■■■■■ 4
XRN1Q8IZH2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC40■■■■□ 3.99
XRN1Q8IZH2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC39.92■■■■□ 3.98
XRN1Q8IZH2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC39.91■■■■□ 3.98
XRN1Q8IZH2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC39.89■■■■□ 3.98
XRN1Q8IZH2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.97
XRN1Q8IZH2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
XRN1Q8IZH2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC39.87■■■■□ 3.97
XRN1Q8IZH2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
XRN1Q8IZH2 DUX4L28-201ENST00000623687 678 ntBASIC39.84■■■■□ 3.97
XRN1Q8IZH2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC39.83■■■■□ 3.97
XRN1Q8IZH2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC39.82■■■■□ 3.97
XRN1Q8IZH2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC39.78■■■■□ 3.96
XRN1Q8IZH2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC39.78■■■■□ 3.96
XRN1Q8IZH2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC39.77■■■■□ 3.96
XRN1Q8IZH2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC39.76■■■■□ 3.96
XRN1Q8IZH2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC39.76■■■■□ 3.96
XRN1Q8IZH2 AC087741.3-201ENST00000624270 1347 ntBASIC39.75■■■■□ 3.95
XRN1Q8IZH2 MIR3665-201ENST00000578708 105 ntBASIC39.74■■■■□ 3.95
XRN1Q8IZH2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
XRN1Q8IZH2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
XRN1Q8IZH2 MIR7108-201ENST00000614319 87 ntBASIC39.71■■■■□ 3.95
XRN1Q8IZH2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC39.71■■■■□ 3.95
XRN1Q8IZH2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
XRN1Q8IZH2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
XRN1Q8IZH2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
XRN1Q8IZH2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC39.66■■■■□ 3.94
XRN1Q8IZH2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC39.64■■■■□ 3.94
XRN1Q8IZH2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC39.64■■■■□ 3.94
XRN1Q8IZH2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC39.6■■■■□ 3.93
XRN1Q8IZH2 AC044849.2-201ENST00000606596 710 ntBASIC39.6■■■■□ 3.93
XRN1Q8IZH2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC39.59■■■■□ 3.93
XRN1Q8IZH2 ABHD17AP4-201ENST00000411545 909 ntBASIC39.59■■■■□ 3.93
XRN1Q8IZH2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC39.57■■■■□ 3.93
XRN1Q8IZH2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC39.56■■■■□ 3.92
XRN1Q8IZH2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC39.56■■■■□ 3.92
XRN1Q8IZH2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC39.54■■■■□ 3.92
XRN1Q8IZH2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC39.51■■■■□ 3.92
XRN1Q8IZH2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC39.51■■■■□ 3.91
XRN1Q8IZH2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC39.49■■■■□ 3.91
XRN1Q8IZH2 MIR762-201ENST00000390236 83 ntBASIC39.48■■■■□ 3.91
XRN1Q8IZH2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC39.47■■■■□ 3.91
XRN1Q8IZH2 AC005559.1-201ENST00000589661 871 ntBASIC39.46■■■■□ 3.91
XRN1Q8IZH2 CHML-205ENST00000638160 705 ntTSL 3 BASIC39.44■■■■□ 3.9
XRN1Q8IZH2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC39.43■■■■□ 3.9
XRN1Q8IZH2 HLA-V-202ENST00000446817 847 ntBASIC39.43■■■■□ 3.9
XRN1Q8IZH2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC39.42■■■■□ 3.9
XRN1Q8IZH2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC39.4■■■■□ 3.9
XRN1Q8IZH2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC39.4■■■■□ 3.9
XRN1Q8IZH2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC39.4■■■■□ 3.9
XRN1Q8IZH2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC39.36■■■■□ 3.89
XRN1Q8IZH2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC39.36■■■■□ 3.89
XRN1Q8IZH2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC39.35■■■■□ 3.89
XRN1Q8IZH2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC39.34■■■■□ 3.89
XRN1Q8IZH2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC39.32■■■■□ 3.89
XRN1Q8IZH2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
XRN1Q8IZH2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC39.31■■■■□ 3.88
XRN1Q8IZH2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
XRN1Q8IZH2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC39.3■■■■□ 3.88
XRN1Q8IZH2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
XRN1Q8IZH2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
XRN1Q8IZH2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC39.27■■■■□ 3.88
XRN1Q8IZH2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC39.26■■■■□ 3.87
XRN1Q8IZH2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
XRN1Q8IZH2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
XRN1Q8IZH2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC39.25■■■■□ 3.87
XRN1Q8IZH2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC39.24■■■■□ 3.87
XRN1Q8IZH2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC39.22■■■■□ 3.87
XRN1Q8IZH2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
XRN1Q8IZH2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
XRN1Q8IZH2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
XRN1Q8IZH2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC39.18■■■■□ 3.86
XRN1Q8IZH2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC39.18■■■■□ 3.86
XRN1Q8IZH2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC39.18■■■■□ 3.86
XRN1Q8IZH2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC39.17■■■■□ 3.86
XRN1Q8IZH2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC39.14■■■■□ 3.86
XRN1Q8IZH2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC39.14■■■■□ 3.86
XRN1Q8IZH2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC39.12■■■■□ 3.85
XRN1Q8IZH2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
XRN1Q8IZH2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
XRN1Q8IZH2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC39.1■■■■□ 3.85
XRN1Q8IZH2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
XRN1Q8IZH2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC39.1■■■■□ 3.85
XRN1Q8IZH2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC39.1■■■■□ 3.85
XRN1Q8IZH2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
XRN1Q8IZH2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
XRN1Q8IZH2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC39.05■■■■□ 3.84
XRN1Q8IZH2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
XRN1Q8IZH2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
XRN1Q8IZH2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC39.04■■■■□ 3.84
XRN1Q8IZH2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC39.04■■■■□ 3.84
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms