Protein–RNA interactions for Protein: Q8IUX4

APOBEC3F, DNA dC->dU-editing enzyme APOBEC-3F, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3FQ8IUX4 AL133380.1-201ENST00000506013 324 ntBASIC33.76■■■□□ 2.99
APOBEC3FQ8IUX4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
APOBEC3FQ8IUX4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
APOBEC3FQ8IUX4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
APOBEC3FQ8IUX4 HNRNPLP2-201ENST00000568980 1570 ntBASIC33.68■■■□□ 2.98
APOBEC3FQ8IUX4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC33.66■■■□□ 2.98
APOBEC3FQ8IUX4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
APOBEC3FQ8IUX4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC33.65■■■□□ 2.98
APOBEC3FQ8IUX4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
APOBEC3FQ8IUX4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC33.61■■■□□ 2.97
APOBEC3FQ8IUX4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC33.61■■■□□ 2.97
APOBEC3FQ8IUX4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC33.61■■■□□ 2.97
APOBEC3FQ8IUX4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
APOBEC3FQ8IUX4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC33.58■■■□□ 2.97
APOBEC3FQ8IUX4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC33.57■■■□□ 2.96
APOBEC3FQ8IUX4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
APOBEC3FQ8IUX4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC33.55■■■□□ 2.96
APOBEC3FQ8IUX4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
APOBEC3FQ8IUX4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC33.54■■■□□ 2.96
APOBEC3FQ8IUX4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC33.54■■■□□ 2.96
APOBEC3FQ8IUX4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
APOBEC3FQ8IUX4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC33.52■■■□□ 2.96
APOBEC3FQ8IUX4 MIR3665-201ENST00000578708 105 ntBASIC33.51■■■□□ 2.95
APOBEC3FQ8IUX4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
APOBEC3FQ8IUX4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC33.5■■■□□ 2.95
APOBEC3FQ8IUX4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
APOBEC3FQ8IUX4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC33.48■■■□□ 2.95
APOBEC3FQ8IUX4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
APOBEC3FQ8IUX4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC33.47■■■□□ 2.95
APOBEC3FQ8IUX4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC33.46■■■□□ 2.95
APOBEC3FQ8IUX4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
APOBEC3FQ8IUX4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
APOBEC3FQ8IUX4 ABHD17AP4-201ENST00000411545 909 ntBASIC33.36■■■□□ 2.93
APOBEC3FQ8IUX4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC33.36■■■□□ 2.93
APOBEC3FQ8IUX4 AC087741.3-201ENST00000624270 1347 ntBASIC33.34■■■□□ 2.93
APOBEC3FQ8IUX4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC33.34■■■□□ 2.93
APOBEC3FQ8IUX4 MIR7108-201ENST00000614319 87 ntBASIC33.33■■■□□ 2.93
APOBEC3FQ8IUX4 DUX4L28-201ENST00000623687 678 ntBASIC33.33■■■□□ 2.93
APOBEC3FQ8IUX4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
APOBEC3FQ8IUX4 CHML-205ENST00000638160 705 ntTSL 3 BASIC33.31■■■□□ 2.92
APOBEC3FQ8IUX4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
APOBEC3FQ8IUX4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC33.3■■■□□ 2.92
APOBEC3FQ8IUX4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC33.29■■■□□ 2.92
APOBEC3FQ8IUX4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC33.29■■■□□ 2.92
APOBEC3FQ8IUX4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
APOBEC3FQ8IUX4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
APOBEC3FQ8IUX4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC33.28■■■□□ 2.92
APOBEC3FQ8IUX4 MIR762-201ENST00000390236 83 ntBASIC33.26■■■□□ 2.91
APOBEC3FQ8IUX4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
APOBEC3FQ8IUX4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC33.24■■■□□ 2.91
APOBEC3FQ8IUX4 AC044849.2-201ENST00000606596 710 ntBASIC33.24■■■□□ 2.91
APOBEC3FQ8IUX4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
APOBEC3FQ8IUX4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC33.22■■■□□ 2.91
APOBEC3FQ8IUX4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
APOBEC3FQ8IUX4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
APOBEC3FQ8IUX4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC33.21■■■□□ 2.91
APOBEC3FQ8IUX4 AC005559.1-201ENST00000589661 871 ntBASIC33.21■■■□□ 2.91
APOBEC3FQ8IUX4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
APOBEC3FQ8IUX4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
APOBEC3FQ8IUX4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
APOBEC3FQ8IUX4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC33.2■■■□□ 2.91
APOBEC3FQ8IUX4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC33.2■■■□□ 2.9
APOBEC3FQ8IUX4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC33.16■■■□□ 2.9
APOBEC3FQ8IUX4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
APOBEC3FQ8IUX4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC33.15■■■□□ 2.9
APOBEC3FQ8IUX4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC33.14■■■□□ 2.9
APOBEC3FQ8IUX4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC33.14■■■□□ 2.9
APOBEC3FQ8IUX4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
APOBEC3FQ8IUX4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC33.11■■■□□ 2.89
APOBEC3FQ8IUX4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
APOBEC3FQ8IUX4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC33.1■■■□□ 2.89
APOBEC3FQ8IUX4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
APOBEC3FQ8IUX4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC33.07■■■□□ 2.88
APOBEC3FQ8IUX4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
APOBEC3FQ8IUX4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC33.05■■■□□ 2.88
APOBEC3FQ8IUX4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC33.05■■■□□ 2.88
APOBEC3FQ8IUX4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
APOBEC3FQ8IUX4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC33.04■■■□□ 2.88
APOBEC3FQ8IUX4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC33.04■■■□□ 2.88
APOBEC3FQ8IUX4 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
APOBEC3FQ8IUX4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC33.02■■■□□ 2.88
APOBEC3FQ8IUX4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC33.02■■■□□ 2.88
APOBEC3FQ8IUX4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
APOBEC3FQ8IUX4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC33.01■■■□□ 2.87
APOBEC3FQ8IUX4 HLA-V-202ENST00000446817 847 ntBASIC33■■■□□ 2.87
APOBEC3FQ8IUX4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.99■■■□□ 2.87
APOBEC3FQ8IUX4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.98■■■□□ 2.87
APOBEC3FQ8IUX4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
APOBEC3FQ8IUX4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC32.97■■■□□ 2.87
APOBEC3FQ8IUX4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.95■■■□□ 2.87
APOBEC3FQ8IUX4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.95■■■□□ 2.87
APOBEC3FQ8IUX4 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
APOBEC3FQ8IUX4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
APOBEC3FQ8IUX4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.94■■■□□ 2.86
APOBEC3FQ8IUX4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
APOBEC3FQ8IUX4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.93■■■□□ 2.86
APOBEC3FQ8IUX4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.92■■■□□ 2.86
APOBEC3FQ8IUX4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC32.92■■■□□ 2.86
APOBEC3FQ8IUX4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
APOBEC3FQ8IUX4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.89■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms