Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC44.17■■■■■ 4.66
ABCA9Q8IUA7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC44.16■■■■■ 4.66
ABCA9Q8IUA7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC44.13■■■■■ 4.65
ABCA9Q8IUA7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC44.08■■■■■ 4.65
ABCA9Q8IUA7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC44.08■■■■■ 4.65
ABCA9Q8IUA7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC44.03■■■■■ 4.64
ABCA9Q8IUA7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC44.02■■■■■ 4.64
ABCA9Q8IUA7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC44.02■■■■■ 4.64
ABCA9Q8IUA7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC44.02■■■■■ 4.64
ABCA9Q8IUA7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC44■■■■■ 4.63
ABCA9Q8IUA7 MIR7108-201ENST00000614319 87 ntBASIC44■■■■■ 4.63
ABCA9Q8IUA7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC43.97■■■■■ 4.63
ABCA9Q8IUA7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC43.96■■■■■ 4.63
ABCA9Q8IUA7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC43.94■■■■■ 4.62
ABCA9Q8IUA7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC43.93■■■■■ 4.62
ABCA9Q8IUA7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC43.93■■■■■ 4.62
ABCA9Q8IUA7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC43.93■■■■■ 4.62
ABCA9Q8IUA7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC43.91■■■■■ 4.62
ABCA9Q8IUA7 DUX4L28-201ENST00000623687 678 ntBASIC43.91■■■■■ 4.62
ABCA9Q8IUA7 MIR3665-201ENST00000578708 105 ntBASIC43.89■■■■■ 4.62
ABCA9Q8IUA7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC43.88■■■■■ 4.62
ABCA9Q8IUA7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC43.88■■■■■ 4.62
ABCA9Q8IUA7 AC087741.3-201ENST00000624270 1347 ntBASIC43.87■■■■■ 4.61
ABCA9Q8IUA7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC43.87■■■■■ 4.61
ABCA9Q8IUA7 ABHD17AP4-201ENST00000411545 909 ntBASIC43.86■■■■■ 4.61
ABCA9Q8IUA7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC43.85■■■■■ 4.61
ABCA9Q8IUA7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC43.84■■■■■ 4.61
ABCA9Q8IUA7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC43.81■■■■■ 4.6
ABCA9Q8IUA7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC43.81■■■■■ 4.6
ABCA9Q8IUA7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC43.8■■■■■ 4.6
ABCA9Q8IUA7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC43.75■■■■■ 4.59
ABCA9Q8IUA7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC43.7■■■■■ 4.59
ABCA9Q8IUA7 AC044849.2-201ENST00000606596 710 ntBASIC43.7■■■■■ 4.59
ABCA9Q8IUA7 HLA-V-202ENST00000446817 847 ntBASIC43.69■■■■■ 4.58
ABCA9Q8IUA7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC43.68■■■■■ 4.58
ABCA9Q8IUA7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC43.66■■■■■ 4.58
ABCA9Q8IUA7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC43.62■■■■■ 4.57
ABCA9Q8IUA7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC43.62■■■■■ 4.57
ABCA9Q8IUA7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC43.61■■■■■ 4.57
ABCA9Q8IUA7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC43.59■■■■■ 4.57
ABCA9Q8IUA7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC43.58■■■■■ 4.57
ABCA9Q8IUA7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC43.57■■■■■ 4.57
ABCA9Q8IUA7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC43.57■■■■■ 4.56
ABCA9Q8IUA7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC43.56■■■■■ 4.56
ABCA9Q8IUA7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC43.56■■■■■ 4.56
ABCA9Q8IUA7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC43.55■■■■■ 4.56
ABCA9Q8IUA7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC43.55■■■■■ 4.56
ABCA9Q8IUA7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC43.52■■■■■ 4.56
ABCA9Q8IUA7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC43.52■■■■■ 4.56
ABCA9Q8IUA7 MIR762-201ENST00000390236 83 ntBASIC43.49■■■■■ 4.55
ABCA9Q8IUA7 CHML-205ENST00000638160 705 ntTSL 3 BASIC43.49■■■■■ 4.55
ABCA9Q8IUA7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC43.48■■■■■ 4.55
ABCA9Q8IUA7 AC005559.1-201ENST00000589661 871 ntBASIC43.48■■■■■ 4.55
ABCA9Q8IUA7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC43.48■■■■■ 4.55
ABCA9Q8IUA7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC43.46■■■■■ 4.55
ABCA9Q8IUA7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC43.46■■■■■ 4.55
ABCA9Q8IUA7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC43.45■■■■■ 4.55
ABCA9Q8IUA7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC43.44■■■■■ 4.54
ABCA9Q8IUA7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC43.44■■■■■ 4.54
ABCA9Q8IUA7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC43.39■■■■■ 4.54
ABCA9Q8IUA7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC43.37■■■■■ 4.53
ABCA9Q8IUA7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC43.33■■■■■ 4.53
ABCA9Q8IUA7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC43.33■■■■■ 4.53
ABCA9Q8IUA7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC43.31■■■■■ 4.52
ABCA9Q8IUA7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC43.3■■■■■ 4.52
ABCA9Q8IUA7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC43.29■■■■■ 4.52
ABCA9Q8IUA7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC43.29■■■■■ 4.52
ABCA9Q8IUA7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC43.28■■■■■ 4.52
ABCA9Q8IUA7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC43.28■■■■■ 4.52
ABCA9Q8IUA7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC43.26■■■■■ 4.52
ABCA9Q8IUA7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC43.24■■■■■ 4.51
ABCA9Q8IUA7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC43.23■■■■■ 4.51
ABCA9Q8IUA7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC43.23■■■■■ 4.51
ABCA9Q8IUA7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC43.23■■■■■ 4.51
ABCA9Q8IUA7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC43.23■■■■■ 4.51
ABCA9Q8IUA7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC43.2■■■■■ 4.51
ABCA9Q8IUA7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC43.15■■■■■ 4.5
ABCA9Q8IUA7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC43.15■■■■■ 4.5
ABCA9Q8IUA7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC43.15■■■■■ 4.5
ABCA9Q8IUA7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC43.14■■■■■ 4.5
ABCA9Q8IUA7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC43.14■■■■■ 4.5
ABCA9Q8IUA7 ZNRF2P2-203ENST00000454624 420 ntBASIC43.13■■■■■ 4.49
ABCA9Q8IUA7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC43.11■■■■■ 4.49
ABCA9Q8IUA7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC43.1■■■■■ 4.49
ABCA9Q8IUA7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC43.1■■■■■ 4.49
ABCA9Q8IUA7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC43.1■■■■■ 4.49
ABCA9Q8IUA7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC43.07■■■■■ 4.49
ABCA9Q8IUA7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC43.06■■■■■ 4.48
ABCA9Q8IUA7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC43.05■■■■■ 4.48
ABCA9Q8IUA7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC43.03■■■■■ 4.48
ABCA9Q8IUA7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC43.02■■■■■ 4.48
ABCA9Q8IUA7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC43.01■■■■■ 4.48
ABCA9Q8IUA7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC43.01■■■■■ 4.48
ABCA9Q8IUA7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC43.01■■■■■ 4.47
ABCA9Q8IUA7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC43■■■■■ 4.47
ABCA9Q8IUA7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC42.99■■■■■ 4.47
ABCA9Q8IUA7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC42.97■■■■■ 4.47
ABCA9Q8IUA7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC42.96■■■■■ 4.47
ABCA9Q8IUA7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC42.95■■■■■ 4.47
ABCA9Q8IUA7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC42.93■■■■■ 4.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms