Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00336Q6ZUF6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.91■□□□□ 0.62
LINC00336Q6ZUF6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00336Q6ZUF6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00336Q6ZUF6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00336Q6ZUF6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC18.89■□□□□ 0.62
LINC00336Q6ZUF6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LINC00336Q6ZUF6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00336Q6ZUF6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00336Q6ZUF6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00336Q6ZUF6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.85■□□□□ 0.61
LINC00336Q6ZUF6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC18.84■□□□□ 0.61
LINC00336Q6ZUF6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LINC00336Q6ZUF6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LINC00336Q6ZUF6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC00336Q6ZUF6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.81■□□□□ 0.6
LINC00336Q6ZUF6 HLA-V-202ENST00000446817 847 ntBASIC18.81■□□□□ 0.6
LINC00336Q6ZUF6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.81■□□□□ 0.6
LINC00336Q6ZUF6 AL133380.1-201ENST00000506013 324 ntBASIC18.8■□□□□ 0.6
LINC00336Q6ZUF6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.8■□□□□ 0.6
LINC00336Q6ZUF6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
LINC00336Q6ZUF6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.79■□□□□ 0.6
LINC00336Q6ZUF6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.79■□□□□ 0.6
LINC00336Q6ZUF6 AC044849.2-201ENST00000606596 710 ntBASIC18.78■□□□□ 0.6
LINC00336Q6ZUF6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00336Q6ZUF6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00336Q6ZUF6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC18.77■□□□□ 0.59
LINC00336Q6ZUF6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00336Q6ZUF6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00336Q6ZUF6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00336Q6ZUF6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00336Q6ZUF6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LINC00336Q6ZUF6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.75■□□□□ 0.59
LINC00336Q6ZUF6 AC087741.3-201ENST00000624270 1347 ntBASIC18.74■□□□□ 0.59
LINC00336Q6ZUF6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC00336Q6ZUF6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00336Q6ZUF6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.73■□□□□ 0.59
LINC00336Q6ZUF6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.71■□□□□ 0.59
LINC00336Q6ZUF6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00336Q6ZUF6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
LINC00336Q6ZUF6 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.7■□□□□ 0.58
LINC00336Q6ZUF6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00336Q6ZUF6 AC145285.7-201ENST00000614819 1539 ntBASIC18.69■□□□□ 0.58
LINC00336Q6ZUF6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LINC00336Q6ZUF6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00336Q6ZUF6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.67■□□□□ 0.58
LINC00336Q6ZUF6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.66■□□□□ 0.58
LINC00336Q6ZUF6 DUX4L28-201ENST00000623687 678 ntBASIC18.66■□□□□ 0.58
LINC00336Q6ZUF6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00336Q6ZUF6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LINC00336Q6ZUF6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00336Q6ZUF6 AC005559.1-201ENST00000589661 871 ntBASIC18.64■□□□□ 0.57
LINC00336Q6ZUF6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.64■□□□□ 0.57
LINC00336Q6ZUF6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.62■□□□□ 0.57
LINC00336Q6ZUF6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LINC00336Q6ZUF6 MIR762-201ENST00000390236 83 ntBASIC18.61■□□□□ 0.57
LINC00336Q6ZUF6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.61■□□□□ 0.57
LINC00336Q6ZUF6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.61■□□□□ 0.57
LINC00336Q6ZUF6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.61■□□□□ 0.57
LINC00336Q6ZUF6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
LINC00336Q6ZUF6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LINC00336Q6ZUF6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.59■□□□□ 0.57
LINC00336Q6ZUF6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LINC00336Q6ZUF6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
LINC00336Q6ZUF6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.58■□□□□ 0.56
LINC00336Q6ZUF6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LINC00336Q6ZUF6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00336Q6ZUF6 ZNRF2P2-203ENST00000454624 420 ntBASIC18.56■□□□□ 0.56
LINC00336Q6ZUF6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.56■□□□□ 0.56
LINC00336Q6ZUF6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00336Q6ZUF6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC00336Q6ZUF6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00336Q6ZUF6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00336Q6ZUF6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00336Q6ZUF6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.54■□□□□ 0.56
LINC00336Q6ZUF6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00336Q6ZUF6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00336Q6ZUF6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.52■□□□□ 0.56
LINC00336Q6ZUF6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00336Q6ZUF6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.5■□□□□ 0.55
LINC00336Q6ZUF6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC18.49■□□□□ 0.55
LINC00336Q6ZUF6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC00336Q6ZUF6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00336Q6ZUF6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00336Q6ZUF6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC18.47■□□□□ 0.55
LINC00336Q6ZUF6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LINC00336Q6ZUF6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LINC00336Q6ZUF6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00336Q6ZUF6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00336Q6ZUF6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LINC00336Q6ZUF6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.44■□□□□ 0.54
LINC00336Q6ZUF6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
LINC00336Q6ZUF6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LINC00336Q6ZUF6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
LINC00336Q6ZUF6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LINC00336Q6ZUF6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LINC00336Q6ZUF6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.41■□□□□ 0.54
LINC00336Q6ZUF6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.41■□□□□ 0.54
LINC00336Q6ZUF6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00336Q6ZUF6 MIR4449-201ENST00000578365 66 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms