Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 NUMB-213ENST00000554818 552 ntTSL 319.72■□□□□ 0.752e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-217ENST00000583210 512 ntTSL 419.7■□□□□ 0.741e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC19.34■□□□□ 0.691e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-215ENST00000555307 1039 ntTSL 517.88■□□□□ 0.452e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC17.66■□□□□ 0.421e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-209ENST00000554315 1740 ntTSL 1 (best)17.61■□□□□ 0.412e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.271e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-225ENST00000557031 567 ntTSL 415.99■□□□□ 0.152e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-230ENST00000557774 847 ntTSL 215.78■□□□□ 0.122e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-208ENST00000579537 372 ntTSL 415.5■□□□□ 0.071e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-202ENST00000361665 4729 ntTSL 5 BASIC15.49■□□□□ 0.071e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.042e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-201ENST00000357480 4672 ntTSL 1 (best) BASIC14.75□□□□□ -0.051e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-202ENST00000356296 3453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.062e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-222ENST00000556700 529 ntTSL 414.53□□□□□ -0.082e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-206ENST00000553415 694 ntTSL 413.18□□□□□ -0.32e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-210ENST00000554394 954 ntTSL 311.13□□□□□ -0.632e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.732e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.892e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-220ENST00000556112 568 ntTSL 45.47□□□□□ -1.532e-6■■■■□ 20.6
HNRNPUQ00839 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC27.57■■■□□ 22e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.912e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.892e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.92e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.732e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-214ENST00000491207 469 ntTSL 418.52■□□□□ 0.562e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-203ENST00000373907 3337 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.332e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-211ENST00000482037 603 ntTSL 516.02■□□□□ 0.162e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-212ENST00000482872 839 ntTSL 514.92□□□□□ -0.022e-6■■■■□ 20.5
HNRNPUQ00839 DLGAP4-215ENST00000495241 794 ntTSL 214.29□□□□□ -0.122e-6■■■■□ 20.5
HNRNPUQ00839 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.32■■□□□ 1.82e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC21.45■■□□□ 1.022e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.92e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-223ENST00000588516 1304 ntTSL 519.25■□□□□ 0.672e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-232ENST00000591579 144 ntTSL 1 (best)15.73■□□□□ 0.112e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-233ENST00000591989 233 ntTSL 315.56■□□□□ 0.082e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC13.35□□□□□ -0.272e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.542e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC11.35□□□□□ -0.592e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-231ENST00000590694 165 ntTSL 57.91□□□□□ -1.142e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-211ENST00000585363 241 ntTSL 56.99□□□□□ -1.292e-6■■■■□ 20.4
HNRNPUQ00839 NEDD4L-236ENST00000592846 484 ntTSL 46.15□□□□□ -1.422e-6■■■■□ 20.4
HNRNPUQ00839 VSNL1-202ENST00000404666 992 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.055e-6■■■■□ 20.3
HNRNPUQ00839 VSNL1-201ENST00000295156 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.155e-6■■■■□ 20.3
HNRNPUQ00839 VSNL1-204ENST00000451533 562 ntTSL 412.89□□□□□ -0.355e-6■■■■□ 20.3
HNRNPUQ00839 VSNL1-205ENST00000457525 576 ntTSL 39.06□□□□□ -0.965e-6■■■■□ 20.3
HNRNPUQ00839 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.235e-6■■■■□ 20.3
HNRNPUQ00839 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC9.01□□□□□ -0.976e-7■■■■□ 20.1
HNRNPUQ00839 ELL2-207ENST00000515020 340 ntTSL 231.19■■■□□ 2.586e-7■■■■□ 20.1
HNRNPUQ00839 ELL2-203ENST00000506628 520 ntTSL 526.48■■□□□ 1.836e-7■■■■□ 20.1
HNRNPUQ00839 ELL2-206ENST00000513343 582 ntTSL 324.94■■□□□ 1.586e-7■■■■□ 20.1
HNRNPUQ00839 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.486e-7■■■■□ 20.1
HNRNPUQ00839 ELL2-208ENST00000635633 467 ntTSL 36.5□□□□□ -1.376e-7■■■■□ 20.1
HNRNPUQ00839 LDLRAD4-212ENST00000587905 743 ntTSL 526.16■■□□□ 1.783e-6■■■■□ 20.1
HNRNPUQ00839 SREBF1-211ENST00000476994 591 ntTSL 223.2■■□□□ 1.33e-6■■■■□ 20.1
HNRNPUQ00839 SREBF1-206ENST00000423161 1058 ntTSL 322.82■■□□□ 1.243e-6■■■■□ 20.1
HNRNPUQ00839 SREBF1-222ENST00000583732 580 ntTSL 418.57■□□□□ 0.563e-6■■■■□ 20.1
HNRNPUQ00839 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC17.98■□□□□ 0.473e-6■■■■□ 20.1
HNRNPUQ00839 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.333e-6■■■■□ 20.1
HNRNPUQ00839 WWC2-207ENST00000508614 604 ntTSL 321.6■■□□□ 1.053e-6■■■■□ 20
HNRNPUQ00839 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.683e-6■■■■□ 20
HNRNPUQ00839 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.663e-6■■■■□ 20
HNRNPUQ00839 WWC2-209ENST00000513834 4887 ntTSL 5 BASIC16.88■□□□□ 0.293e-6■■■■□ 20
HNRNPUQ00839 WWC2-204ENST00000448232 6356 ntTSL 5 BASIC14.91□□□□□ -0.023e-6■■■■□ 20
HNRNPUQ00839 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC18.54■□□□□ 0.568e-7■■■■□ 19.9
HNRNPUQ00839 TCEA3-203ENST00000450454 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.078e-7■■■■□ 19.9
HNRNPUQ00839 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.614e-9■■■■□ 19.9
HNRNPUQ00839 RNASET2-204ENST00000421787 1924 ntTSL 228.03■■■□□ 2.084e-9■■■■□ 19.9
HNRNPUQ00839 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.39■■□□□ 1.824e-9■■■■□ 19.9
HNRNPUQ00839 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.89■■□□□ 1.574e-9■■■■□ 19.9
HNRNPUQ00839 RNASET2-201ENST00000028008 1220 ntTSL 523.94■■□□□ 1.424e-9■■■■□ 19.9
HNRNPUQ00839 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC23.77■■□□□ 1.44e-6■■■■□ 19.9
HNRNPUQ00839 RNASET2-207ENST00000478180 963 ntTSL 523.11■■□□□ 1.294e-9■■■■□ 19.9
HNRNPUQ00839 RNASET2-202ENST00000358165 2445 ntTSL 222.71■■□□□ 1.234e-6■■■■□ 19.9
HNRNPUQ00839 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.114e-9■■■■□ 19.9
HNRNPUQ00839 RNASET2-209ENST00000499370 2164 ntTSL 215.25■□□□□ 0.034e-6■■■■□ 19.9
HNRNPUQ00839 RNASET2-208ENST00000496851 881 ntTSL 513.33□□□□□ -0.284e-6■■■■□ 19.9
HNRNPUQ00839 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.864e-9■■■■□ 19.9
HNRNPUQ00839 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC26.93■■□□□ 1.97e-7■■■■□ 19.8
HNRNPUQ00839 MFSD10-203ENST00000503596 1589 ntTSL 526.09■■□□□ 1.777e-7■■■■□ 19.8
HNRNPUQ00839 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.767e-7■■■■□ 19.8
HNRNPUQ00839 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.657e-7■■■■□ 19.8
HNRNPUQ00839 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC24.93■■□□□ 1.587e-7■■■■□ 19.8
HNRNPUQ00839 MFSD10-208ENST00000509676 1178 ntTSL 520.58■□□□□ 0.897e-7■■■■□ 19.8
HNRNPUQ00839 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC33.59■■■□□ 2.976e-6■■■■□ 19.8
HNRNPUQ00839 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.056e-6■■■■□ 19.8
HNRNPUQ00839 DHFR-205ENST00000511032 1474 ntTSL 2 BASIC14.32□□□□□ -0.126e-6■■■■□ 19.8
HNRNPUQ00839 DHFR-206ENST00000513048 994 ntTSL 1 (best)12.51□□□□□ -0.416e-6■■■■□ 19.8
HNRNPUQ00839 DHFR-202ENST00000504396 1447 ntTSL 2 BASIC10.84□□□□□ -0.676e-6■■■■□ 19.8
HNRNPUQ00839 DHFR-204ENST00000508282 545 ntTSL 38.96□□□□□ -0.986e-6■■■■□ 19.8
HNRNPUQ00839 DHFR-207ENST00000513314 582 ntTSL 38.16□□□□□ -1.16e-6■■■■□ 19.8
HNRNPUQ00839 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC35.73■■■■□ 3.312e-11■■■■□ 19.7
HNRNPUQ00839 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.212e-11■■■■□ 19.7
HNRNPUQ00839 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC27.44■■□□□ 1.982e-11■■■■□ 19.7
HNRNPUQ00839 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.772e-11■■■■□ 19.7
HNRNPUQ00839 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.362e-11■■■■□ 19.7
HNRNPUQ00839 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.332e-11■■■■□ 19.7
HNRNPUQ00839 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.22■□□□□ 0.992e-11■■■■□ 19.7
HNRNPUQ00839 YAP1-203ENST00000524575 1638 ntTSL 2 BASIC11.69□□□□□ -0.542e-11■■■■□ 19.7
HNRNPUQ00839 YAP1-205ENST00000526594 785 ntTSL 38.03□□□□□ -1.122e-11■■■■□ 19.7
Retrieved 100 of 2,288 protein–RNA pairs in 24.1 ms