RNA–Protein interactions for RNA: ENST00000592846.5

NEDD4L-236, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4L, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-236ENST00000592846 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
NEDD4L-236ENST00000592846 DNAJC5Q9H3Z4 198 aa15.5■□□□□ 0.07
NEDD4L-236ENST00000592846 CHIC1Q5VXU3 224 aa15.44■□□□□ 0.06
NEDD4L-236ENST00000592846 ABCC9O60706 1549 aa15.37■□□□□ 0.05
NEDD4L-236ENST00000592846 AEBP2Q6ZN18 517 aaPredicted RBP15.02■□□□□ -0
NEDD4L-236ENST00000592846 NISCHQ9Y2I1 1504 aa14.96□□□□□ -0.02
NEDD4L-236ENST00000592846 TRIM41Q8WV44 630 aa14.12□□□□□ -0.15
NEDD4L-236ENST00000592846 PABPN1Q86U42 306 aaKnown RBP eCLIP14.06□□□□□ -0.16
NEDD4L-236ENST00000592846 CCDC180Q9P1Z9 1646 aa14.05□□□□□ -0.16
NEDD4L-236ENST00000592846 RB1CC1Q8TDY2 1594 aa14.05□□□□□ -0.16
NEDD4L-236ENST00000592846 CECR2Q9BXF3 1484 aa14.02□□□□□ -0.16
NEDD4L-236ENST00000592846 CUX2O14529 1486 aa13.88□□□□□ -0.19
NEDD4L-236ENST00000592846 CC2D2AQ9P2K1 1620 aa13.85□□□□□ -0.19
NEDD4L-236ENST00000592846 UNC13AQ9UPW8 1703 aa13.75□□□□□ -0.21
NEDD4L-236ENST00000592846 BICRAQ9NZM4 1560 aa13.72□□□□□ -0.21
NEDD4L-236ENST00000592846 NACADO15069 1562 aa13.62□□□□□ -0.23
NEDD4L-236ENST00000592846 PHF23Q9BUL5 403 aaPredicted RBP13.61□□□□□ -0.23
NEDD4L-236ENST00000592846 ILDR1Q86SU0 546 aaPredicted RBP13.5□□□□□ -0.25
NEDD4L-236ENST00000592846 EIF4G1Q04637 1599 aaKnown RBP13.47□□□□□ -0.25
NEDD4L-236ENST00000592846 SHROOM4Q9ULL8 1493 aa13.41□□□□□ -0.26
NEDD4L-236ENST00000592846 ERCC6Q03468 1493 aa13.36□□□□□ -0.27
NEDD4L-236ENST00000592846 DCAF8L2P0C7V8 631 aa13.12□□□□□ -0.31
NEDD4L-236ENST00000592846 TRHP20396 242 aaPredicted RBP13.03□□□□□ -0.32
NEDD4L-236ENST00000592846 MYO15BQ96JP2 1530 aa13.01□□□□□ -0.33
NEDD4L-236ENST00000592846 THOC2Q8NI27 1593 aaKnown RBP13□□□□□ -0.33
NEDD4L-236ENST00000592846 OSCARQ8IYS5 282 aa12.98□□□□□ -0.33
NEDD4L-236ENST00000592846 RIMBP3CA6NJZ7 1639 aa12.98□□□□□ -0.33
NEDD4L-236ENST00000592846 RIMBP3BA6NNM3 1639 aa12.98□□□□□ -0.33
NEDD4L-236ENST00000592846 RIMBP3Q9UFD9 1639 aa12.98□□□□□ -0.33
NEDD4L-236ENST00000592846 BAZ1AQ9NRL2 1556 aaPredicted RBP12.92□□□□□ -0.34
NEDD4L-236ENST00000592846 PLPPR3Q6T4P5 718 aa12.9□□□□□ -0.34
NEDD4L-236ENST00000592846 NESP48681 1621 aa12.81□□□□□ -0.36
NEDD4L-236ENST00000592846 ARHGEF11O15085 1522 aa12.79□□□□□ -0.36
NEDD4L-236ENST00000592846 CYB5RLQ6IPT4 315 aa12.75□□□□□ -0.37
NEDD4L-236ENST00000592846 SCRIBQ14160 1630 aa12.74□□□□□ -0.37
NEDD4L-236ENST00000592846 SENP3Q9H4L4 574 aaPredicted RBP12.72□□□□□ -0.37
NEDD4L-236ENST00000592846 SOCS7O14512 581 aa12.7□□□□□ -0.38
NEDD4L-236ENST00000592846 SMARCA2P51531 1590 aa12.69□□□□□ -0.38
NEDD4L-236ENST00000592846 LMTK3Q96Q04 1460 aa12.68□□□□□ -0.38
NEDD4L-236ENST00000592846 KIF21AQ7Z4S6 1674 aa12.61□□□□□ -0.39
NEDD4L-236ENST00000592846 NCAPD3P42695 1498 aa12.6□□□□□ -0.39
NEDD4L-236ENST00000592846 FBXO41Q8TF61 875 aa12.58□□□□□ -0.4
NEDD4L-236ENST00000592846 ARAP1Q96P48 1450 aa12.57□□□□□ -0.4
NEDD4L-236ENST00000592846 LAMC3Q9Y6N6 1575 aa12.53□□□□□ -0.4
NEDD4L-236ENST00000592846 ILDR2Q71H61 639 aa12.51□□□□□ -0.41
NEDD4L-236ENST00000592846 WDR62O43379 1518 aa12.5□□□□□ -0.41
NEDD4L-236ENST00000592846 PDS5BQ9NTI5 1447 aa12.49□□□□□ -0.41
NEDD4L-236ENST00000592846 ERCC6L2Q5T890 1561 aa12.47□□□□□ -0.41
NEDD4L-236ENST00000592846 KDM4FA0A1W2PPD8 638 aa12.46□□□□□ -0.41
NEDD4L-236ENST00000592846 MRC2Q9UBG0 1479 aa12.46□□□□□ -0.42
NEDD4L-236ENST00000592846 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
NEDD4L-236ENST00000592846 ATAD2BQ9ULI0 1458 aa12.34□□□□□ -0.43
NEDD4L-236ENST00000592846 DCAF1Q9Y4B6 1507 aa12.31□□□□□ -0.44
NEDD4L-236ENST00000592846 HECW2Q9P2P5 1572 aa12.3□□□□□ -0.44
NEDD4L-236ENST00000592846 RSF1Q96T23 1441 aaPredicted RBP12.29□□□□□ -0.44
NEDD4L-236ENST00000592846 DISP3Q9P2K9 1392 aa12.28□□□□□ -0.44
NEDD4L-236ENST00000592846 CADPSQ9ULU8 1353 aa12.13□□□□□ -0.47
NEDD4L-236ENST00000592846 SYNJ2O15056 1496 aa12.13□□□□□ -0.47
NEDD4L-236ENST00000592846 BAZ1BQ9UIG0 1483 aaKnown RBP12.11□□□□□ -0.47
NEDD4L-236ENST00000592846 CEP164Q9UPV0 1460 aa12.11□□□□□ -0.47
NEDD4L-236ENST00000592846 EHMT2Q96KQ7 1210 aa12.11□□□□□ -0.47
NEDD4L-236ENST00000592846 CHD1O14646 1710 aa12.09□□□□□ -0.47
NEDD4L-236ENST00000592846 ZCCHC6Q5VYS8 1495 aaKnown RBP12.08□□□□□ -0.47
NEDD4L-236ENST00000592846 SMARCA4P51532 1647 aa12.08□□□□□ -0.48
NEDD4L-236ENST00000592846 ZNF608Q9ULD9 1512 aaPredicted RBP12.06□□□□□ -0.48
NEDD4L-236ENST00000592846 KIF13AQ9H1H9 1805 aa12.04□□□□□ -0.48
NEDD4L-236ENST00000592846 SPATA31D1Q6ZQQ2 1576 aa12.01□□□□□ -0.49
NEDD4L-236ENST00000592846 ADGRL1O94910 1474 aa12□□□□□ -0.49
NEDD4L-236ENST00000592846 ADRA2BP18089 450 aa11.99□□□□□ -0.49
NEDD4L-236ENST00000592846 KCNA4P22459 653 aa11.99□□□□□ -0.49
NEDD4L-236ENST00000592846 URB2Q14146 1524 aaKnown RBP11.98□□□□□ -0.49
NEDD4L-236ENST00000592846 FANCD2Q9BXW9 1451 aa11.97□□□□□ -0.49
NEDD4L-236ENST00000592846 CLASP1Q7Z460 1538 aa11.96□□□□□ -0.5
NEDD4L-236ENST00000592846 IFT140Q96RY7 1462 aa11.94□□□□□ -0.5
NEDD4L-236ENST00000592846 KDM6BO15054 1643 aa11.93□□□□□ -0.5
NEDD4L-236ENST00000592846 GAPVD1Q14C86 1478 aa11.92□□□□□ -0.5
NEDD4L-236ENST00000592846 EIF4G3O43432 1585 aaKnown RBP11.92□□□□□ -0.5
NEDD4L-236ENST00000592846 FBLN2P98095 1184 aa11.91□□□□□ -0.5
NEDD4L-236ENST00000592846 PEG3Q9GZU2 1588 aa11.9□□□□□ -0.5
NEDD4L-236ENST00000592846 SYNJ1O43426 1573 aa11.78□□□□□ -0.52
NEDD4L-236ENST00000592846 FAM69CQ0P6D2 419 aa11.77□□□□□ -0.53
NEDD4L-236ENST00000592846 ABCC10Q5T3U5 1492 aa11.76□□□□□ -0.53
NEDD4L-236ENST00000592846 AQRO60306 1485 aaKnown RBP eCLIP11.76□□□□□ -0.533e-6■■■□□ 15.8
NEDD4L-236ENST00000592846 CERKQ8TCT0 537 aa11.75□□□□□ -0.53
NEDD4L-236ENST00000592846 PPP6R1Q9UPN7 881 aa11.75□□□□□ -0.53
NEDD4L-236ENST00000592846 CFTRP13569 1480 aa11.7□□□□□ -0.54
NEDD4L-236ENST00000592846 DIP2BQ9P265 1576 aa11.68□□□□□ -0.54
NEDD4L-236ENST00000592846 FOXD1Q16676 465 aa11.66□□□□□ -0.54
NEDD4L-236ENST00000592846 TOP2BQ02880 1626 aa11.64□□□□□ -0.55
NEDD4L-236ENST00000592846 TSPOAP1O95153 1857 aa11.63□□□□□ -0.55
NEDD4L-236ENST00000592846 TARBP1Q13395 1621 aaKnown RBP11.63□□□□□ -0.55
NEDD4L-236ENST00000592846 CHMP7Q8WUX9 453 aaPredicted RBP11.62□□□□□ -0.55
NEDD4L-236ENST00000592846 MAPKBP1O60336 1514 aa11.6□□□□□ -0.55
NEDD4L-236ENST00000592846 TOPBP1Q92547 1522 aa11.6□□□□□ -0.55
NEDD4L-236ENST00000592846 MROH2BQ7Z745 1585 aa11.59□□□□□ -0.55
NEDD4L-236ENST00000592846 SLC4A1APQ9BWU0 796 aaKnown RBP11.59□□□□□ -0.55
NEDD4L-236ENST00000592846 SNAPC4Q5SXM2 1469 aa11.58□□□□□ -0.56
NEDD4L-236ENST00000592846 CSRNP3Q8WYN3 585 aa11.56□□□□□ -0.56
NEDD4L-236ENST00000592846 MAGI1Q96QZ7 1491 aaPredicted RBP11.52□□□□□ -0.56
NEDD4L-236ENST00000592846 PCF11O94913 1555 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms