RNA–Protein interactions for RNA: ENST00000587905.5

LDLRAD4-212, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 5

Gene LDLRAD4, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-212ENST00000587905 NISCHQ9Y2I1 1504 aa49.48■■■■■ 5.51
LDLRAD4-212ENST00000587905 CCDC180Q9P1Z9 1646 aa44■■■■■ 4.63
LDLRAD4-212ENST00000587905 ABCC9O60706 1549 aa43.15■■■■■ 4.5
LDLRAD4-212ENST00000587905 DCAF8L2P0C7V8 631 aa41.51■■■■■ 4.24
LDLRAD4-212ENST00000587905 RB1CC1Q8TDY2 1594 aa41.44■■■■■ 4.22
LDLRAD4-212ENST00000587905 NACADO15069 1562 aa41.35■■■■■ 4.21
LDLRAD4-212ENST00000587905 ZCCHC6Q5VYS8 1495 aaKnown RBP41.21■■■■■ 4.19
LDLRAD4-212ENST00000587905 MYO15BQ96JP2 1530 aa41.02■■■■■ 4.16
LDLRAD4-212ENST00000587905 DCAF1Q9Y4B6 1507 aa40.87■■■■■ 4.13
LDLRAD4-212ENST00000587905 UNC13AQ9UPW8 1703 aa40.56■■■■■ 4.08
LDLRAD4-212ENST00000587905 PABPN1Q86U42 306 aaKnown RBP eCLIP40.33■■■■■ 4.05
LDLRAD4-212ENST00000587905 SCRIBQ14160 1630 aa40.26■■■■■ 4.04
LDLRAD4-212ENST00000587905 BICRAQ9NZM4 1560 aa40.17■■■■■ 4.02
LDLRAD4-212ENST00000587905 SHROOM4Q9ULL8 1493 aa39.65■■■■□ 3.94
LDLRAD4-212ENST00000587905 DNAJC5BQ9UF47 199 aa39.54■■■■□ 3.92
LDLRAD4-212ENST00000587905 EIF4G1Q04637 1599 aaKnown RBP39.13■■■■□ 3.85
LDLRAD4-212ENST00000587905 CC2D2AQ9P2K1 1620 aa39■■■■□ 3.83
LDLRAD4-212ENST00000587905 CECR2Q9BXF3 1484 aa38.72■■■■□ 3.79
LDLRAD4-212ENST00000587905 SMARCA4P51532 1647 aa38.44■■■■□ 3.74
LDLRAD4-212ENST00000587905 BAZ1AQ9NRL2 1556 aaPredicted RBP38.37■■■■□ 3.73
LDLRAD4-212ENST00000587905 ATAD2BQ9ULI0 1458 aa38.19■■■■□ 3.7
LDLRAD4-212ENST00000587905 MROH2BQ7Z745 1585 aa38.18■■■■□ 3.7
LDLRAD4-212ENST00000587905 SMARCA2P51531 1590 aa38.14■■■■□ 3.7
LDLRAD4-212ENST00000587905 NCAPD3P42695 1498 aa38.13■■■■□ 3.69
LDLRAD4-212ENST00000587905 PEG3Q9GZU2 1588 aa37.97■■■■□ 3.67
LDLRAD4-212ENST00000587905 HMGXB3Q12766 1538 aa37.97■■■■□ 3.67
LDLRAD4-212ENST00000587905 BAZ1BQ9UIG0 1483 aaKnown RBP37.93■■■■□ 3.66
LDLRAD4-212ENST00000587905 WIZO95785 1651 aa37.81■■■■□ 3.64
LDLRAD4-212ENST00000587905 RSF1Q96T23 1441 aaPredicted RBP37.7■■■■□ 3.63
LDLRAD4-212ENST00000587905 TOP2AP11388 1531 aaKnown RBP37.36■■■■□ 3.57
LDLRAD4-212ENST00000587905 NESP48681 1621 aa37.32■■■■□ 3.57
LDLRAD4-212ENST00000587905 ERCC6Q03468 1493 aa37.2■■■■□ 3.54
LDLRAD4-212ENST00000587905 LAMC3Q9Y6N6 1575 aa37.17■■■■□ 3.54
LDLRAD4-212ENST00000587905 CADPSQ9ULU8 1353 aa37.04■■■■□ 3.52
LDLRAD4-212ENST00000587905 PDS5BQ9NTI5 1447 aa36.92■■■■□ 3.5
LDLRAD4-212ENST00000587905 KIF21AQ7Z4S6 1674 aa36.91■■■■□ 3.5
LDLRAD4-212ENST00000587905 CCDC88BA6NC98 1476 aa36.91■■■■□ 3.5
LDLRAD4-212ENST00000587905 SUPT5HO00267 1087 aaKnown RBP36.88■■■■□ 3.49
LDLRAD4-212ENST00000587905 CFTRP13569 1480 aa36.82■■■■□ 3.48
LDLRAD4-212ENST00000587905 THOC2Q8NI27 1593 aaKnown RBP36.73■■■■□ 3.47
LDLRAD4-212ENST00000587905 CUX2O14529 1486 aa36.7■■■■□ 3.47
LDLRAD4-212ENST00000587905 FANCD2Q9BXW9 1451 aa36.67■■■■□ 3.46
LDLRAD4-212ENST00000587905 CEP164Q9UPV0 1460 aa36.63■■■■□ 3.45
LDLRAD4-212ENST00000587905 PRDM2Q13029 1718 aa36.62■■■■□ 3.45
LDLRAD4-212ENST00000587905 MRC2Q9UBG0 1479 aa36.56■■■■□ 3.44
LDLRAD4-212ENST00000587905 WDR62O43379 1518 aa36.42■■■■□ 3.42
LDLRAD4-212ENST00000587905 URB2Q14146 1524 aaKnown RBP36.3■■■■□ 3.4
LDLRAD4-212ENST00000587905 TOPBP1Q92547 1522 aa36.08■■■■□ 3.37
LDLRAD4-212ENST00000587905 DNMBPQ6XZF7 1577 aa36.03■■■■□ 3.36
LDLRAD4-212ENST00000587905 ABCC8Q09428 1581 aa36.02■■■■□ 3.36
LDLRAD4-212ENST00000587905 IFT140Q96RY7 1462 aa35.83■■■■□ 3.33
LDLRAD4-212ENST00000587905 CUX1P39880 1505 aa35.82■■■■□ 3.32
LDLRAD4-212ENST00000587905 POLA1P09884 1462 aaPredicted RBP35.77■■■■□ 3.32
LDLRAD4-212ENST00000587905 FGD5Q6ZNL6 1462 aa35.71■■■■□ 3.31
LDLRAD4-212ENST00000587905 ZNF608Q9ULD9 1512 aaPredicted RBP35.71■■■■□ 3.31
LDLRAD4-212ENST00000587905 TARBP1Q13395 1621 aaKnown RBP35.68■■■■□ 3.3
LDLRAD4-212ENST00000587905 RAD54L2Q9Y4B4 1467 aa35.66■■■■□ 3.3
LDLRAD4-212ENST00000587905 SOGA1O94964 1423 aa35.63■■■■□ 3.29
LDLRAD4-212ENST00000587905 DNAJC5Q9H3Z4 198 aa35.59■■■■□ 3.29
LDLRAD4-212ENST00000587905 EIF4G3O43432 1585 aaKnown RBP35.59■■■■□ 3.29
LDLRAD4-212ENST00000587905 WRNQ14191 1432 aaPredicted RBP eCLIP35.58■■■■□ 3.29
LDLRAD4-212ENST00000587905 SYNJ1O43426 1573 aa35.52■■■■□ 3.28
LDLRAD4-212ENST00000587905 AQRO60306 1485 aaKnown RBP eCLIP35.51■■■■□ 3.28
LDLRAD4-212ENST00000587905 TOP2BQ02880 1626 aa35.5■■■■□ 3.27
LDLRAD4-212ENST00000587905 BIVM-ERCC5R4GMW8 1640 aa35.5■■■■□ 3.27
LDLRAD4-212ENST00000587905 TDRD9Q8NDG6 1382 aaKnown RBP35.46■■■■□ 3.27
LDLRAD4-212ENST00000587905 WDR97A6NE52 1622 aa35.4■■■■□ 3.26
LDLRAD4-212ENST00000587905 ABCA10Q8WWZ4 1543 aa35.3■■■■□ 3.24
LDLRAD4-212ENST00000587905 GAPVD1Q14C86 1478 aa35.22■■■■□ 3.23
LDLRAD4-212ENST00000587905 OSCARQ8IYS5 282 aa35.21■■■■□ 3.23
LDLRAD4-212ENST00000587905 PBRM1Q86U86 1689 aa35.21■■■■□ 3.23
LDLRAD4-212ENST00000587905 GRIN2BQ13224 1484 aa35.2■■■■□ 3.23
LDLRAD4-212ENST00000587905 ABCA5Q8WWZ7 1642 aa35.2■■■■□ 3.23
LDLRAD4-212ENST00000587905 SNAPC4Q5SXM2 1469 aa35.19■■■■□ 3.22
LDLRAD4-212ENST00000587905 CHD1O14646 1710 aa35.18■■■■□ 3.22
LDLRAD4-212ENST00000587905 FBLN2P98095 1184 aa35.16■■■■□ 3.22
LDLRAD4-212ENST00000587905 MAGI1Q96QZ7 1491 aaPredicted RBP35.09■■■■□ 3.21
LDLRAD4-212ENST00000587905 CHMP7Q8WUX9 453 aaPredicted RBP35■■■■□ 3.19
LDLRAD4-212ENST00000587905 SYNJ2O15056 1496 aa34.97■■■■□ 3.19
LDLRAD4-212ENST00000587905 ERICH3Q5RHP9 1530 aa34.89■■■■□ 3.18
LDLRAD4-212ENST00000587905 ADAMTS12P58397 1594 aa34.88■■■■□ 3.17
LDLRAD4-212ENST00000587905 KIF27Q86VH2 1401 aa34.83■■■■□ 3.17
LDLRAD4-212ENST00000587905 TRIM41Q8WV44 630 aa34.79■■■■□ 3.16
LDLRAD4-212ENST00000587905 FHAD1B1AJZ9 1412 aa34.79■■■■□ 3.16
LDLRAD4-212ENST00000587905 GRIN2AQ12879 1464 aa34.76■■■■□ 3.15
LDLRAD4-212ENST00000587905 CLASP1Q7Z460 1538 aa34.71■■■■□ 3.15
LDLRAD4-212ENST00000587905 RIMBP3CA6NJZ7 1639 aa34.7■■■■□ 3.14
LDLRAD4-212ENST00000587905 RIMBP3BA6NNM3 1639 aa34.7■■■■□ 3.14
LDLRAD4-212ENST00000587905 RIMBP3Q9UFD9 1639 aa34.7■■■■□ 3.14
LDLRAD4-212ENST00000587905 ARHGEF11O15085 1522 aa34.66■■■■□ 3.14
LDLRAD4-212ENST00000587905 IGF1RP08069 1367 aa34.65■■■■□ 3.14
LDLRAD4-212ENST00000587905 CUL7Q14999 1698 aa34.61■■■■□ 3.13
LDLRAD4-212ENST00000587905 CEP170Q5SW79 1584 aa34.61■■■■□ 3.13
LDLRAD4-212ENST00000587905 NUP160Q12769 1436 aa34.56■■■■□ 3.12
LDLRAD4-212ENST00000587905 RUSC2Q8N2Y8 1516 aa34.56■■■■□ 3.12
LDLRAD4-212ENST00000587905 CARMIL1Q5VZK9 1371 aa34.49■■■■□ 3.11
LDLRAD4-212ENST00000587905 ARAP1Q96P48 1450 aa34.39■■■■□ 3.1
LDLRAD4-212ENST00000587905 CYB5RLQ6IPT4 315 aa34.38■■■■□ 3.09
LDLRAD4-212ENST00000587905 CHIC1Q5VXU3 224 aa34.33■■■■□ 3.09
LDLRAD4-212ENST00000587905 SHROOM2Q13796 1616 aa34.32■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms