RNA–Protein interactions for RNA: ENST00000591989.5

NEDD4L-233, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 233 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-233ENST00000591989 NISCHQ9Y2I1 1504 aa30.32■■■□□ 2.44
NEDD4L-233ENST00000591989 ABCC9O60706 1549 aa27.78■■■□□ 2.04
NEDD4L-233ENST00000591989 CCDC180Q9P1Z9 1646 aa27.35■■□□□ 1.97
NEDD4L-233ENST00000591989 DNAJC5BQ9UF47 199 aa26.51■■□□□ 1.83
NEDD4L-233ENST00000591989 RB1CC1Q8TDY2 1594 aa26.21■■□□□ 1.79
NEDD4L-233ENST00000591989 NACADO15069 1562 aa25.9■■□□□ 1.74
NEDD4L-233ENST00000591989 UNC13AQ9UPW8 1703 aa25.77■■□□□ 1.72
NEDD4L-233ENST00000591989 PABPN1Q86U42 306 aaKnown RBP eCLIP25.71■■□□□ 1.71
NEDD4L-233ENST00000591989 DCAF8L2P0C7V8 631 aa25.65■■□□□ 1.7
NEDD4L-233ENST00000591989 BICRAQ9NZM4 1560 aa25.56■■□□□ 1.68
NEDD4L-233ENST00000591989 MYO15BQ96JP2 1530 aa25.4■■□□□ 1.66
NEDD4L-233ENST00000591989 ZCCHC6Q5VYS8 1495 aaKnown RBP25.16■■□□□ 1.62
NEDD4L-233ENST00000591989 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
NEDD4L-233ENST00000591989 SHROOM4Q9ULL8 1493 aa25.09■■□□□ 1.61
NEDD4L-233ENST00000591989 CECR2Q9BXF3 1484 aa25.07■■□□□ 1.6
NEDD4L-233ENST00000591989 DCAF1Q9Y4B6 1507 aa25■■□□□ 1.59
NEDD4L-233ENST00000591989 EIF4G1Q04637 1599 aaKnown RBP24.93■■□□□ 1.58
NEDD4L-233ENST00000591989 SCRIBQ14160 1630 aa24.87■■□□□ 1.57
NEDD4L-233ENST00000591989 DNAJC5Q9H3Z4 198 aa24.65■■□□□ 1.54
NEDD4L-233ENST00000591989 CUX2O14529 1486 aa24.16■■□□□ 1.46
NEDD4L-233ENST00000591989 ERCC6Q03468 1493 aa23.98■■□□□ 1.43
NEDD4L-233ENST00000591989 NCAPD3P42695 1498 aa23.91■■□□□ 1.42
NEDD4L-233ENST00000591989 ATAD2BQ9ULI0 1458 aa23.79■■□□□ 1.4
NEDD4L-233ENST00000591989 NESP48681 1621 aa23.76■■□□□ 1.39
NEDD4L-233ENST00000591989 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
NEDD4L-233ENST00000591989 THOC2Q8NI27 1593 aaKnown RBP23.69■■□□□ 1.38
NEDD4L-233ENST00000591989 SMARCA4P51532 1647 aa23.68■■□□□ 1.38
NEDD4L-233ENST00000591989 SMARCA2P51531 1590 aa23.68■■□□□ 1.38
NEDD4L-233ENST00000591989 BAZ1BQ9UIG0 1483 aaKnown RBP23.51■■□□□ 1.35
NEDD4L-233ENST00000591989 BAZ1AQ9NRL2 1556 aaPredicted RBP23.51■■□□□ 1.35
NEDD4L-233ENST00000591989 LAMC3Q9Y6N6 1575 aa23.48■■□□□ 1.35
NEDD4L-233ENST00000591989 KIF21AQ7Z4S6 1674 aa23.48■■□□□ 1.35
NEDD4L-233ENST00000591989 PEG3Q9GZU2 1588 aa23.46■■□□□ 1.35
NEDD4L-233ENST00000591989 MROH2BQ7Z745 1585 aa23.39■■□□□ 1.33
NEDD4L-233ENST00000591989 TRIM41Q8WV44 630 aa23.32■■□□□ 1.32
NEDD4L-233ENST00000591989 PDS5BQ9NTI5 1447 aa23.28■■□□□ 1.32
NEDD4L-233ENST00000591989 WDR62O43379 1518 aa23.2■■□□□ 1.3
NEDD4L-233ENST00000591989 MRC2Q9UBG0 1479 aa23.19■■□□□ 1.3
NEDD4L-233ENST00000591989 WIZO95785 1651 aa23.16■■□□□ 1.3
NEDD4L-233ENST00000591989 CADPSQ9ULU8 1353 aa23.13■■□□□ 1.29
NEDD4L-233ENST00000591989 RSF1Q96T23 1441 aaPredicted RBP23■■□□□ 1.27
NEDD4L-233ENST00000591989 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
NEDD4L-233ENST00000591989 FANCD2Q9BXW9 1451 aa22.91■■□□□ 1.26
NEDD4L-233ENST00000591989 TOP2AP11388 1531 aaKnown RBP22.83■■□□□ 1.25
NEDD4L-233ENST00000591989 OSCARQ8IYS5 282 aa22.83■■□□□ 1.25
NEDD4L-233ENST00000591989 CFTRP13569 1480 aa22.8■■□□□ 1.24
NEDD4L-233ENST00000591989 URB2Q14146 1524 aaKnown RBP22.8■■□□□ 1.24
NEDD4L-233ENST00000591989 RIMBP3CA6NJZ7 1639 aa22.78■■□□□ 1.24
NEDD4L-233ENST00000591989 RIMBP3BA6NNM3 1639 aa22.78■■□□□ 1.24
NEDD4L-233ENST00000591989 RIMBP3Q9UFD9 1639 aa22.78■■□□□ 1.24
NEDD4L-233ENST00000591989 ARHGEF11O15085 1522 aa22.63■■□□□ 1.21
NEDD4L-233ENST00000591989 PRDM2Q13029 1718 aa22.63■■□□□ 1.21
NEDD4L-233ENST00000591989 ZNF608Q9ULD9 1512 aaPredicted RBP22.6■■□□□ 1.21
NEDD4L-233ENST00000591989 CCDC88BA6NC98 1476 aa22.6■■□□□ 1.21
NEDD4L-233ENST00000591989 IFT140Q96RY7 1462 aa22.53■■□□□ 1.2
NEDD4L-233ENST00000591989 EIF4G3O43432 1585 aaKnown RBP22.49■■□□□ 1.19
NEDD4L-233ENST00000591989 TOPBP1Q92547 1522 aa22.44■■□□□ 1.18
NEDD4L-233ENST00000591989 CHD1O14646 1710 aa22.43■■□□□ 1.18
NEDD4L-233ENST00000591989 ARAP1Q96P48 1450 aa22.4■■□□□ 1.18
NEDD4L-233ENST00000591989 SUPT5HO00267 1087 aaKnown RBP22.38■■□□□ 1.17
NEDD4L-233ENST00000591989 CYB5RLQ6IPT4 315 aa22.35■■□□□ 1.17
NEDD4L-233ENST00000591989 TARBP1Q13395 1621 aaKnown RBP22.33■■□□□ 1.17
NEDD4L-233ENST00000591989 DNMBPQ6XZF7 1577 aa22.32■■□□□ 1.16
NEDD4L-233ENST00000591989 AQRO60306 1485 aaKnown RBP eCLIP22.27■■□□□ 1.16
NEDD4L-233ENST00000591989 ABCC8Q09428 1581 aa22.26■■□□□ 1.15
NEDD4L-233ENST00000591989 TRHP20396 242 aaPredicted RBP22.22■■□□□ 1.15
NEDD4L-233ENST00000591989 POLA1P09884 1462 aaPredicted RBP22.18■■□□□ 1.14
NEDD4L-233ENST00000591989 CLASP1Q7Z460 1538 aa22.15■■□□□ 1.14
NEDD4L-233ENST00000591989 FBLN2P98095 1184 aa22.1■■□□□ 1.13
NEDD4L-233ENST00000591989 RAD54L2Q9Y4B4 1467 aa22.09■■□□□ 1.13
NEDD4L-233ENST00000591989 SNAPC4Q5SXM2 1469 aa22.07■■□□□ 1.12
NEDD4L-233ENST00000591989 WDR97A6NE52 1622 aa22.02■■□□□ 1.12
NEDD4L-233ENST00000591989 TDRD9Q8NDG6 1382 aaKnown RBP22.02■■□□□ 1.12
NEDD4L-233ENST00000591989 SYNJ1O43426 1573 aa22.01■■□□□ 1.11
NEDD4L-233ENST00000591989 SOGA1O94964 1423 aa21.98■■□□□ 1.11
NEDD4L-233ENST00000591989 MAGI1Q96QZ7 1491 aaPredicted RBP21.96■■□□□ 1.11
NEDD4L-233ENST00000591989 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
NEDD4L-233ENST00000591989 CUX1P39880 1505 aa21.95■■□□□ 1.1
NEDD4L-233ENST00000591989 AEBP2Q6ZN18 517 aaPredicted RBP21.93■■□□□ 1.1
NEDD4L-233ENST00000591989 SYNJ2O15056 1496 aa21.9■■□□□ 1.1
NEDD4L-233ENST00000591989 GRIN2BQ13224 1484 aa21.89■■□□□ 1.09
NEDD4L-233ENST00000591989 PBRM1Q86U86 1689 aa21.88■■□□□ 1.09
NEDD4L-233ENST00000591989 GAPVD1Q14C86 1478 aa21.86■■□□□ 1.09
NEDD4L-233ENST00000591989 CHMP7Q8WUX9 453 aaPredicted RBP21.86■■□□□ 1.09
NEDD4L-233ENST00000591989 ERCC6L2Q5T890 1561 aa21.78■■□□□ 1.08
NEDD4L-233ENST00000591989 ABCA5Q8WWZ7 1642 aa21.77■■□□□ 1.07
NEDD4L-233ENST00000591989 WRNQ14191 1432 aaPredicted RBP eCLIP21.72■■□□□ 1.07
NEDD4L-233ENST00000591989 ABCA10Q8WWZ4 1543 aa21.68■■□□□ 1.06
NEDD4L-233ENST00000591989 TOP2BQ02880 1626 aa21.67■■□□□ 1.06
NEDD4L-233ENST00000591989 BIVM-ERCC5R4GMW8 1640 aa21.67■■□□□ 1.06
NEDD4L-233ENST00000591989 CEP170Q5SW79 1584 aa21.65■■□□□ 1.06
NEDD4L-233ENST00000591989 KIF13AQ9H1H9 1805 aa21.64■■□□□ 1.06
NEDD4L-233ENST00000591989 GRIN2AQ12879 1464 aa21.64■■□□□ 1.05
NEDD4L-233ENST00000591989 ADAMTS12P58397 1594 aa21.63■■□□□ 1.05
NEDD4L-233ENST00000591989 SHROOM2Q13796 1616 aa21.62■■□□□ 1.05
NEDD4L-233ENST00000591989 NUP160Q12769 1436 aa21.61■■□□□ 1.05
NEDD4L-233ENST00000591989 FHAD1B1AJZ9 1412 aa21.44■■□□□ 1.02
NEDD4L-233ENST00000591989 ERICH3Q5RHP9 1530 aa21.39■■□□□ 1.02
NEDD4L-233ENST00000591989 PRG4Q92954 1404 aaPredicted RBP21.38■■□□□ 1.01
NEDD4L-233ENST00000591989 ABCC10Q5T3U5 1492 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms