RNA–Protein interactions for RNA: ENST00000585363.5

NEDD4L-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 241 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-211ENST00000585363 NISCHQ9Y2I1 1504 aa15.12■□□□□ 0.01
NEDD4L-211ENST00000585363 ABCC9O60706 1549 aa14.47□□□□□ -0.09
NEDD4L-211ENST00000585363 DNAJC5BQ9UF47 199 aa14.09□□□□□ -0.15
NEDD4L-211ENST00000585363 CCDC180Q9P1Z9 1646 aa13.94□□□□□ -0.18
NEDD4L-211ENST00000585363 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
NEDD4L-211ENST00000585363 DNAJC5Q9H3Z4 198 aa13.42□□□□□ -0.26
NEDD4L-211ENST00000585363 PABPN1Q86U42 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
NEDD4L-211ENST00000585363 UNC13AQ9UPW8 1703 aa13.3□□□□□ -0.28
NEDD4L-211ENST00000585363 NACADO15069 1562 aa13.28□□□□□ -0.28
NEDD4L-211ENST00000585363 BICRAQ9NZM4 1560 aa13.16□□□□□ -0.3
NEDD4L-211ENST00000585363 CECR2Q9BXF3 1484 aa13.11□□□□□ -0.31
NEDD4L-211ENST00000585363 CC2D2AQ9P2K1 1620 aa13.09□□□□□ -0.31
NEDD4L-211ENST00000585363 DCAF8L2P0C7V8 631 aa12.95□□□□□ -0.34
NEDD4L-211ENST00000585363 SHROOM4Q9ULL8 1493 aa12.94□□□□□ -0.34
NEDD4L-211ENST00000585363 EIF4G1Q04637 1599 aaKnown RBP12.9□□□□□ -0.35
NEDD4L-211ENST00000585363 MYO15BQ96JP2 1530 aa12.88□□□□□ -0.35
NEDD4L-211ENST00000585363 CUX2O14529 1486 aa12.78□□□□□ -0.36
NEDD4L-211ENST00000585363 SCRIBQ14160 1630 aa12.62□□□□□ -0.39
NEDD4L-211ENST00000585363 TRIM41Q8WV44 630 aa12.57□□□□□ -0.4
NEDD4L-211ENST00000585363 ERCC6Q03468 1493 aa12.56□□□□□ -0.4
NEDD4L-211ENST00000585363 DCAF1Q9Y4B6 1507 aa12.47□□□□□ -0.41
NEDD4L-211ENST00000585363 ZCCHC6Q5VYS8 1495 aaKnown RBP12.42□□□□□ -0.42
NEDD4L-211ENST00000585363 THOC2Q8NI27 1593 aaKnown RBP12.33□□□□□ -0.44
NEDD4L-211ENST00000585363 NESP48681 1621 aa12.26□□□□□ -0.45
NEDD4L-211ENST00000585363 NCAPD3P42695 1498 aa12.22□□□□□ -0.45
NEDD4L-211ENST00000585363 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
NEDD4L-211ENST00000585363 KIF21AQ7Z4S6 1674 aa12.15□□□□□ -0.46
NEDD4L-211ENST00000585363 HMGXB3Q12766 1538 aa12.13□□□□□ -0.47
NEDD4L-211ENST00000585363 BAZ1AQ9NRL2 1556 aaPredicted RBP12.13□□□□□ -0.47
NEDD4L-211ENST00000585363 LAMC3Q9Y6N6 1575 aa12.11□□□□□ -0.47
NEDD4L-211ENST00000585363 ATAD2BQ9ULI0 1458 aa12.1□□□□□ -0.47
NEDD4L-211ENST00000585363 RIMBP3CA6NJZ7 1639 aa12.02□□□□□ -0.49
NEDD4L-211ENST00000585363 RIMBP3BA6NNM3 1639 aa12.02□□□□□ -0.49
NEDD4L-211ENST00000585363 RIMBP3Q9UFD9 1639 aa12.02□□□□□ -0.49
NEDD4L-211ENST00000585363 PDS5BQ9NTI5 1447 aa12.01□□□□□ -0.49
NEDD4L-211ENST00000585363 OSCARQ8IYS5 282 aa12□□□□□ -0.49
NEDD4L-211ENST00000585363 AEBP2Q6ZN18 517 aaPredicted RBP11.99□□□□□ -0.49
NEDD4L-211ENST00000585363 SMARCA4P51532 1647 aa11.98□□□□□ -0.49
NEDD4L-211ENST00000585363 WDR62O43379 1518 aa11.98□□□□□ -0.49
NEDD4L-211ENST00000585363 MRC2Q9UBG0 1479 aa11.97□□□□□ -0.49
NEDD4L-211ENST00000585363 BAZ1BQ9UIG0 1483 aaKnown RBP11.96□□□□□ -0.49
NEDD4L-211ENST00000585363 ARHGEF11O15085 1522 aa11.89□□□□□ -0.51
NEDD4L-211ENST00000585363 PEG3Q9GZU2 1588 aa11.86□□□□□ -0.51
NEDD4L-211ENST00000585363 TRHP20396 242 aaPredicted RBP11.85□□□□□ -0.51
NEDD4L-211ENST00000585363 CADPSQ9ULU8 1353 aa11.8□□□□□ -0.52
NEDD4L-211ENST00000585363 CEP164Q9UPV0 1460 aa11.8□□□□□ -0.52
NEDD4L-211ENST00000585363 CYB5RLQ6IPT4 315 aa11.76□□□□□ -0.53
NEDD4L-211ENST00000585363 ARAP1Q96P48 1450 aa11.72□□□□□ -0.53
NEDD4L-211ENST00000585363 FANCD2Q9BXW9 1451 aa11.7□□□□□ -0.54
NEDD4L-211ENST00000585363 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.54
NEDD4L-211ENST00000585363 MROH2BQ7Z745 1585 aa11.64□□□□□ -0.55
NEDD4L-211ENST00000585363 CHD1O14646 1710 aa11.63□□□□□ -0.55
NEDD4L-211ENST00000585363 ZNF608Q9ULD9 1512 aaPredicted RBP11.6□□□□□ -0.55
NEDD4L-211ENST00000585363 RSF1Q96T23 1441 aaPredicted RBP11.6□□□□□ -0.55
NEDD4L-211ENST00000585363 ILDR1Q86SU0 546 aaPredicted RBP11.59□□□□□ -0.55
NEDD4L-211ENST00000585363 EIF4G3O43432 1585 aaKnown RBP11.58□□□□□ -0.56
NEDD4L-211ENST00000585363 IFT140Q96RY7 1462 aa11.57□□□□□ -0.56
NEDD4L-211ENST00000585363 CFTRP13569 1480 aa11.56□□□□□ -0.56
NEDD4L-211ENST00000585363 PRDM2Q13029 1718 aa11.52□□□□□ -0.56
NEDD4L-211ENST00000585363 WIZO95785 1651 aa11.51□□□□□ -0.57
NEDD4L-211ENST00000585363 CLASP1Q7Z460 1538 aa11.45□□□□□ -0.58
NEDD4L-211ENST00000585363 TOPBP1Q92547 1522 aa11.42□□□□□ -0.58
NEDD4L-211ENST00000585363 FBLN2P98095 1184 aa11.42□□□□□ -0.58
NEDD4L-211ENST00000585363 AQRO60306 1485 aaKnown RBP eCLIP11.39□□□□□ -0.59
NEDD4L-211ENST00000585363 TARBP1Q13395 1621 aaKnown RBP11.39□□□□□ -0.59
NEDD4L-211ENST00000585363 SYNJ1O43426 1573 aa11.38□□□□□ -0.59
NEDD4L-211ENST00000585363 DNMBPQ6XZF7 1577 aa11.35□□□□□ -0.59
NEDD4L-211ENST00000585363 ABCC8Q09428 1581 aa11.34□□□□□ -0.59
NEDD4L-211ENST00000585363 GAPVD1Q14C86 1478 aa11.34□□□□□ -0.59
NEDD4L-211ENST00000585363 KIF13AQ9H1H9 1805 aa11.33□□□□□ -0.6
NEDD4L-211ENST00000585363 TOP2AP11388 1531 aaKnown RBP11.31□□□□□ -0.6
NEDD4L-211ENST00000585363 SNAPC4Q5SXM2 1469 aa11.31□□□□□ -0.6
NEDD4L-211ENST00000585363 KDM4FA0A1W2PPD8 638 aa11.27□□□□□ -0.61
NEDD4L-211ENST00000585363 WDR97A6NE52 1622 aa11.27□□□□□ -0.61
NEDD4L-211ENST00000585363 POLA1P09884 1462 aaPredicted RBP11.26□□□□□ -0.61
NEDD4L-211ENST00000585363 MAGI1Q96QZ7 1491 aaPredicted RBP11.25□□□□□ -0.61
NEDD4L-211ENST00000585363 CHMP7Q8WUX9 453 aaPredicted RBP11.24□□□□□ -0.61
NEDD4L-211ENST00000585363 ERCC6L2Q5T890 1561 aa11.22□□□□□ -0.61
NEDD4L-211ENST00000585363 SYNJ2O15056 1496 aa11.21□□□□□ -0.61
NEDD4L-211ENST00000585363 RAD54L2Q9Y4B4 1467 aa11.21□□□□□ -0.61
NEDD4L-211ENST00000585363 TDRD9Q8NDG6 1382 aaKnown RBP11.21□□□□□ -0.61
NEDD4L-211ENST00000585363 KDM6BO15054 1643 aa11.19□□□□□ -0.62
NEDD4L-211ENST00000585363 GRIN2BQ13224 1484 aa11.17□□□□□ -0.62
NEDD4L-211ENST00000585363 PBRM1Q86U86 1689 aa11.17□□□□□ -0.62
NEDD4L-211ENST00000585363 HECW2Q9P2P5 1572 aa11.16□□□□□ -0.62
NEDD4L-211ENST00000585363 SOGA1O94964 1423 aa11.16□□□□□ -0.62
NEDD4L-211ENST00000585363 CCDC88BA6NC98 1476 aa11.14□□□□□ -0.63
NEDD4L-211ENST00000585363 CEP170Q5SW79 1584 aa11.12□□□□□ -0.63
NEDD4L-211ENST00000585363 ABCC10Q5T3U5 1492 aa11.11□□□□□ -0.63
NEDD4L-211ENST00000585363 DIP2BQ9P265 1576 aa11.11□□□□□ -0.63
NEDD4L-211ENST00000585363 FBXO41Q8TF61 875 aa11.1□□□□□ -0.63
NEDD4L-211ENST00000585363 FGD5Q6ZNL6 1462 aa11.1□□□□□ -0.63
NEDD4L-211ENST00000585363 SHROOM2Q13796 1616 aa11.09□□□□□ -0.63
NEDD4L-211ENST00000585363 ADGRL1O94910 1474 aa11.08□□□□□ -0.64
NEDD4L-211ENST00000585363 FAM69CQ0P6D2 419 aa11.08□□□□□ -0.64
NEDD4L-211ENST00000585363 TSPOAP1O95153 1857 aa11.08□□□□□ -0.64
NEDD4L-211ENST00000585363 MAPKBP1O60336 1514 aa11.06□□□□□ -0.64
NEDD4L-211ENST00000585363 GRIN2AQ12879 1464 aa11.03□□□□□ -0.64
NEDD4L-211ENST00000585363 LMTK3Q96Q04 1460 aa11.03□□□□□ -0.64
NEDD4L-211ENST00000585363 ABCA5Q8WWZ7 1642 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms