Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.15■■□□□ 1.78
RPP38P78345 AL031258.1-201ENST00000623562 325 ntBASIC26.14■■□□□ 1.78
RPP38P78345 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RPP38P78345 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RPP38P78345 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.13■■□□□ 1.77
RPP38P78345 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
RPP38P78345 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RPP38P78345 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
RPP38P78345 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RPP38P78345 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RPP38P78345 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
RPP38P78345 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RPP38P78345 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.06■■□□□ 1.76
RPP38P78345 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RPP38P78345 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RPP38P78345 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RPP38P78345 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RPP38P78345 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
RPP38P78345 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.02■■□□□ 1.76
RPP38P78345 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.02■■□□□ 1.76
RPP38P78345 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RPP38P78345 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.02■■□□□ 1.76
RPP38P78345 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RPP38P78345 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
RPP38P78345 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
RPP38P78345 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
RPP38P78345 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.97■■□□□ 1.75
RPP38P78345 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.97■■□□□ 1.75
RPP38P78345 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RPP38P78345 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RPP38P78345 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
RPP38P78345 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
RPP38P78345 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RPP38P78345 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
RPP38P78345 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RPP38P78345 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.93■■□□□ 1.74
RPP38P78345 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.93■■□□□ 1.74
RPP38P78345 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.93■■□□□ 1.74
RPP38P78345 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.92■■□□□ 1.74
RPP38P78345 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RPP38P78345 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RPP38P78345 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RPP38P78345 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
RPP38P78345 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RPP38P78345 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RPP38P78345 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RPP38P78345 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
RPP38P78345 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.86■■□□□ 1.73
RPP38P78345 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RPP38P78345 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.85■■□□□ 1.73
RPP38P78345 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.85■■□□□ 1.73
RPP38P78345 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RPP38P78345 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RPP38P78345 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RPP38P78345 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.72
RPP38P78345 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RPP38P78345 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.82■■□□□ 1.72
RPP38P78345 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
RPP38P78345 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.78■■□□□ 1.72
RPP38P78345 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RPP38P78345 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.75■■□□□ 1.71
RPP38P78345 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
RPP38P78345 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RPP38P78345 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.73■■□□□ 1.71
RPP38P78345 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RPP38P78345 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
RPP38P78345 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RPP38P78345 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RPP38P78345 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.68■■□□□ 1.7
RPP38P78345 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RPP38P78345 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.68■■□□□ 1.7
RPP38P78345 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.66■■□□□ 1.7
RPP38P78345 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.65■■□□□ 1.7
RPP38P78345 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RPP38P78345 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.64■■□□□ 1.7
RPP38P78345 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
RPP38P78345 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.64■■□□□ 1.7
RPP38P78345 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.64■■□□□ 1.7
RPP38P78345 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RPP38P78345 RARRES2P7-201ENST00000567349 469 ntBASIC25.63■■□□□ 1.69
RPP38P78345 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
RPP38P78345 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
RPP38P78345 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RPP38P78345 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.6■■□□□ 1.69
RPP38P78345 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RPP38P78345 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RPP38P78345 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.59■■□□□ 1.69
RPP38P78345 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
RPP38P78345 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
RPP38P78345 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RPP38P78345 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RPP38P78345 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RPP38P78345 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.55■■□□□ 1.68
RPP38P78345 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RPP38P78345 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
RPP38P78345 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.53■■□□□ 1.68
RPP38P78345 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RPP38P78345 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RPP38P78345 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RPP38P78345 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms