Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
GABREP78334 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
GABREP78334 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
GABREP78334 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
GABREP78334 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
GABREP78334 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
GABREP78334 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
GABREP78334 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.9■■□□□ 1.9
GABREP78334 AL133380.1-201ENST00000506013 324 ntBASIC26.89■■□□□ 1.9
GABREP78334 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
GABREP78334 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
GABREP78334 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.86■■□□□ 1.89
GABREP78334 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.86■■□□□ 1.89
GABREP78334 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
GABREP78334 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
GABREP78334 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
GABREP78334 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
GABREP78334 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
GABREP78334 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.8■■□□□ 1.88
GABREP78334 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
GABREP78334 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.78■■□□□ 1.88
GABREP78334 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.77■■□□□ 1.88
GABREP78334 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
GABREP78334 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
GABREP78334 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
GABREP78334 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
GABREP78334 MIR3665-201ENST00000578708 105 ntBASIC26.74■■□□□ 1.87
GABREP78334 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.73■■□□□ 1.87
GABREP78334 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.73■■□□□ 1.87
GABREP78334 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.73■■□□□ 1.87
GABREP78334 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.72■■□□□ 1.87
GABREP78334 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
GABREP78334 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
GABREP78334 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.7■■□□□ 1.86
GABREP78334 MIR7108-201ENST00000614319 87 ntBASIC26.7■■□□□ 1.86
GABREP78334 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.68■■□□□ 1.86
GABREP78334 ABHD17AP4-201ENST00000411545 909 ntBASIC26.68■■□□□ 1.86
GABREP78334 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
GABREP78334 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
GABREP78334 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
GABREP78334 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
GABREP78334 AC087741.3-201ENST00000624270 1347 ntBASIC26.61■■□□□ 1.85
GABREP78334 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
GABREP78334 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.6■■□□□ 1.85
GABREP78334 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.6■■□□□ 1.85
GABREP78334 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
GABREP78334 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.58■■□□□ 1.85
GABREP78334 DUX4L28-201ENST00000623687 678 ntBASIC26.58■■□□□ 1.85
GABREP78334 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
GABREP78334 AC044849.2-201ENST00000606596 710 ntBASIC26.54■■□□□ 1.84
GABREP78334 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.54■■□□□ 1.84
GABREP78334 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
GABREP78334 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.52■■□□□ 1.84
GABREP78334 MIR762-201ENST00000390236 83 ntBASIC26.52■■□□□ 1.84
GABREP78334 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
GABREP78334 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.51■■□□□ 1.83
GABREP78334 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
GABREP78334 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
GABREP78334 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
GABREP78334 AC005559.1-201ENST00000589661 871 ntBASIC26.49■■□□□ 1.83
GABREP78334 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.49■■□□□ 1.83
GABREP78334 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.49■■□□□ 1.83
GABREP78334 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
GABREP78334 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
GABREP78334 HLA-V-202ENST00000446817 847 ntBASIC26.45■■□□□ 1.82
GABREP78334 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.45■■□□□ 1.82
GABREP78334 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.44■■□□□ 1.82
GABREP78334 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.43■■□□□ 1.82
GABREP78334 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
GABREP78334 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.42■■□□□ 1.82
GABREP78334 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.42■■□□□ 1.82
GABREP78334 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.42■■□□□ 1.82
GABREP78334 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.4■■□□□ 1.82
GABREP78334 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.4■■□□□ 1.82
GABREP78334 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
GABREP78334 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.39■■□□□ 1.82
GABREP78334 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
GABREP78334 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
GABREP78334 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
GABREP78334 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
GABREP78334 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
GABREP78334 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
GABREP78334 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.36■■□□□ 1.81
GABREP78334 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
GABREP78334 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.33■■□□□ 1.81
GABREP78334 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.33■■□□□ 1.81
GABREP78334 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
GABREP78334 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
GABREP78334 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
GABREP78334 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
GABREP78334 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.31■■□□□ 1.8
GABREP78334 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
GABREP78334 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
GABREP78334 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.3■■□□□ 1.8
GABREP78334 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.29■■□□□ 1.8
GABREP78334 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.29■■□□□ 1.8
GABREP78334 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
GABREP78334 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
GABREP78334 ZNRF2P2-203ENST00000454624 420 ntBASIC26.27■■□□□ 1.8
GABREP78334 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms