Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC36.71■■■■□ 3.47
KCNQ4P56696 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
KCNQ4P56696 MIR7108-201ENST00000614319 87 ntBASIC36.68■■■■□ 3.46
KCNQ4P56696 AL133380.1-201ENST00000506013 324 ntBASIC36.67■■■■□ 3.46
KCNQ4P56696 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC36.65■■■■□ 3.46
KCNQ4P56696 ABHD17AP4-201ENST00000411545 909 ntBASIC36.64■■■■□ 3.46
KCNQ4P56696 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC36.63■■■■□ 3.45
KCNQ4P56696 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
KCNQ4P56696 HNRNPLP2-201ENST00000568980 1570 ntBASIC36.61■■■■□ 3.45
KCNQ4P56696 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
KCNQ4P56696 PVT1-219ENST00000523427 938 ntTSL 3 BASIC36.6■■■■□ 3.45
KCNQ4P56696 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
KCNQ4P56696 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC36.59■■■■□ 3.45
KCNQ4P56696 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC36.59■■■■□ 3.45
KCNQ4P56696 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
KCNQ4P56696 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
KCNQ4P56696 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
KCNQ4P56696 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
KCNQ4P56696 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC36.55■■■■□ 3.44
KCNQ4P56696 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
KCNQ4P56696 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC36.51■■■■□ 3.43
KCNQ4P56696 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
KCNQ4P56696 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC36.48■■■■□ 3.43
KCNQ4P56696 EBPL-202ENST00000378268 680 ntTSL 3 BASIC36.47■■■■□ 3.43
KCNQ4P56696 AC087741.3-201ENST00000624270 1347 ntBASIC36.43■■■■□ 3.42
KCNQ4P56696 MIR3665-201ENST00000578708 105 ntBASIC36.42■■■■□ 3.42
KCNQ4P56696 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC36.41■■■■□ 3.42
KCNQ4P56696 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC36.41■■■■□ 3.42
KCNQ4P56696 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
KCNQ4P56696 DUX4L28-201ENST00000623687 678 ntBASIC36.4■■■■□ 3.42
KCNQ4P56696 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC36.37■■■■□ 3.41
KCNQ4P56696 MBP-237ENST00000579129 1052 ntTSL 5 BASIC36.37■■■■□ 3.41
KCNQ4P56696 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC36.35■■■■□ 3.41
KCNQ4P56696 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
KCNQ4P56696 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC36.34■■■■□ 3.41
KCNQ4P56696 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC36.33■■■■□ 3.41
KCNQ4P56696 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC36.31■■■■□ 3.4
KCNQ4P56696 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
KCNQ4P56696 MLEC-202ENST00000412616 841 ntTSL 3 BASIC36.29■■■■□ 3.4
KCNQ4P56696 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC36.29■■■■□ 3.4
KCNQ4P56696 HLA-V-202ENST00000446817 847 ntBASIC36.29■■■■□ 3.4
KCNQ4P56696 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC36.22■■■■□ 3.39
KCNQ4P56696 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
KCNQ4P56696 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC36.21■■■■□ 3.39
KCNQ4P56696 MIR762-201ENST00000390236 83 ntBASIC36.2■■■■□ 3.39
KCNQ4P56696 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC36.19■■■■□ 3.38
KCNQ4P56696 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC36.19■■■■□ 3.38
KCNQ4P56696 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC36.18■■■■□ 3.38
KCNQ4P56696 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC36.18■■■■□ 3.38
KCNQ4P56696 CHML-205ENST00000638160 705 ntTSL 3 BASIC36.17■■■■□ 3.38
KCNQ4P56696 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC36.14■■■■□ 3.38
KCNQ4P56696 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
KCNQ4P56696 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC36.13■■■■□ 3.37
KCNQ4P56696 AC044849.2-201ENST00000606596 710 ntBASIC36.13■■■■□ 3.37
KCNQ4P56696 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
KCNQ4P56696 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
KCNQ4P56696 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC36.12■■■■□ 3.37
KCNQ4P56696 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC36.11■■■■□ 3.37
KCNQ4P56696 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
KCNQ4P56696 AC005559.1-201ENST00000589661 871 ntBASIC36.1■■■■□ 3.37
KCNQ4P56696 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
KCNQ4P56696 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC36.05■■■■□ 3.36
KCNQ4P56696 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC36.04■■■■□ 3.36
KCNQ4P56696 ZNRF2P2-203ENST00000454624 420 ntBASIC36.01■■■■□ 3.36
KCNQ4P56696 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC36.01■■■■□ 3.36
KCNQ4P56696 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC36■■■■□ 3.35
KCNQ4P56696 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC35.99■■■■□ 3.35
KCNQ4P56696 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC35.99■■■■□ 3.35
KCNQ4P56696 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
KCNQ4P56696 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC35.96■■■■□ 3.35
KCNQ4P56696 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC35.96■■■■□ 3.35
KCNQ4P56696 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC35.95■■■■□ 3.35
KCNQ4P56696 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC35.94■■■■□ 3.34
KCNQ4P56696 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC35.94■■■■□ 3.34
KCNQ4P56696 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC35.93■■■■□ 3.34
KCNQ4P56696 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
KCNQ4P56696 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
KCNQ4P56696 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC35.9■■■■□ 3.34
KCNQ4P56696 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
KCNQ4P56696 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC35.89■■■■□ 3.34
KCNQ4P56696 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC35.88■■■■□ 3.33
KCNQ4P56696 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
KCNQ4P56696 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
KCNQ4P56696 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC35.86■■■■□ 3.33
KCNQ4P56696 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
KCNQ4P56696 BOD1-206ENST00000480951 814 ntTSL 2 BASIC35.85■■■■□ 3.33
KCNQ4P56696 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC35.83■■■■□ 3.33
KCNQ4P56696 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC35.83■■■■□ 3.33
KCNQ4P56696 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC35.82■■■■□ 3.32
KCNQ4P56696 RPS2-202ENST00000526522 924 ntTSL 2 BASIC35.81■■■■□ 3.32
KCNQ4P56696 HGH1-207ENST00000628266 258 ntTSL 5 BASIC35.81■■■■□ 3.32
KCNQ4P56696 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
KCNQ4P56696 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
KCNQ4P56696 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
KCNQ4P56696 DENR-202ENST00000455982 1052 ntTSL 5 BASIC35.75■■■■□ 3.31
KCNQ4P56696 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC35.75■■■■□ 3.31
KCNQ4P56696 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
KCNQ4P56696 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
KCNQ4P56696 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC35.71■■■■□ 3.31
KCNQ4P56696 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms