Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.7■□□□□ 0.9
CMC4P56277 RARRES2P7-201ENST00000567349 469 ntBASIC20.68■□□□□ 0.9
CMC4P56277 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
CMC4P56277 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CMC4P56277 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.67■□□□□ 0.9
CMC4P56277 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.65■□□□□ 0.9
CMC4P56277 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CMC4P56277 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.64■□□□□ 0.89
CMC4P56277 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CMC4P56277 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.63■□□□□ 0.89
CMC4P56277 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CMC4P56277 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CMC4P56277 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CMC4P56277 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CMC4P56277 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.6■□□□□ 0.89
CMC4P56277 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
CMC4P56277 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CMC4P56277 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CMC4P56277 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CMC4P56277 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CMC4P56277 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CMC4P56277 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CMC4P56277 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CMC4P56277 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CMC4P56277 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CMC4P56277 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.55■□□□□ 0.88
CMC4P56277 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CMC4P56277 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CMC4P56277 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CMC4P56277 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CMC4P56277 SETD8P1-201ENST00000623146 1180 ntBASIC20.53■□□□□ 0.88
CMC4P56277 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.53■□□□□ 0.88
CMC4P56277 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CMC4P56277 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CMC4P56277 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CMC4P56277 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CMC4P56277 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.5■□□□□ 0.87
CMC4P56277 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CMC4P56277 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.48■□□□□ 0.87
CMC4P56277 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CMC4P56277 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CMC4P56277 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CMC4P56277 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CMC4P56277 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CMC4P56277 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CMC4P56277 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CMC4P56277 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CMC4P56277 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CMC4P56277 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CMC4P56277 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CMC4P56277 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CMC4P56277 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.44■□□□□ 0.86
CMC4P56277 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CMC4P56277 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CMC4P56277 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CMC4P56277 AL133380.1-201ENST00000506013 324 ntBASIC20.42■□□□□ 0.86
CMC4P56277 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CMC4P56277 AC097358.2-201ENST00000607541 1159 ntBASIC20.41■□□□□ 0.86
CMC4P56277 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.4■□□□□ 0.86
CMC4P56277 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CMC4P56277 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CMC4P56277 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CMC4P56277 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CMC4P56277 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CMC4P56277 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CMC4P56277 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CMC4P56277 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CMC4P56277 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CMC4P56277 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CMC4P56277 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CMC4P56277 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CMC4P56277 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CMC4P56277 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.33■□□□□ 0.85
CMC4P56277 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
CMC4P56277 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CMC4P56277 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.31■□□□□ 0.84
CMC4P56277 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CMC4P56277 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.31■□□□□ 0.84
CMC4P56277 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.31■□□□□ 0.84
CMC4P56277 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.31■□□□□ 0.84
CMC4P56277 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CMC4P56277 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CMC4P56277 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CMC4P56277 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.29■□□□□ 0.84
CMC4P56277 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CMC4P56277 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.28■□□□□ 0.84
CMC4P56277 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CMC4P56277 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CMC4P56277 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.27■□□□□ 0.84
CMC4P56277 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.27■□□□□ 0.84
CMC4P56277 WASH5P-204ENST00000632292 975 ntBASIC20.27■□□□□ 0.84
CMC4P56277 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.26■□□□□ 0.83
CMC4P56277 AC136428.2-201ENST00000563187 214 ntBASIC20.26■□□□□ 0.83
CMC4P56277 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
CMC4P56277 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CMC4P56277 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CMC4P56277 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CMC4P56277 AC120057.4-201ENST00000624722 1615 ntBASIC20.24■□□□□ 0.83
CMC4P56277 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CMC4P56277 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms