Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.33■■□□□ 1.97
CLCNKAP51800 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CLCNKAP51800 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLCNKAP51800 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CLCNKAP51800 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CLCNKAP51800 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.28■■□□□ 1.96
CLCNKAP51800 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CLCNKAP51800 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
CLCNKAP51800 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.26■■□□□ 1.95
CLCNKAP51800 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
CLCNKAP51800 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CLCNKAP51800 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CLCNKAP51800 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CLCNKAP51800 AC097358.2-201ENST00000607541 1159 ntBASIC27.24■■□□□ 1.95
CLCNKAP51800 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CLCNKAP51800 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.23■■□□□ 1.95
CLCNKAP51800 AC136428.2-201ENST00000563187 214 ntBASIC27.23■■□□□ 1.95
CLCNKAP51800 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.23■■□□□ 1.95
CLCNKAP51800 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.2■■□□□ 1.95
CLCNKAP51800 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CLCNKAP51800 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.18■■□□□ 1.94
CLCNKAP51800 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
CLCNKAP51800 AL133380.1-201ENST00000506013 324 ntBASIC27.15■■□□□ 1.94
CLCNKAP51800 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CLCNKAP51800 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CLCNKAP51800 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
CLCNKAP51800 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CLCNKAP51800 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.12■■□□□ 1.93
CLCNKAP51800 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CLCNKAP51800 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CLCNKAP51800 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CLCNKAP51800 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.1■■□□□ 1.93
CLCNKAP51800 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CLCNKAP51800 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.09■■□□□ 1.93
CLCNKAP51800 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CLCNKAP51800 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.07■■□□□ 1.92
CLCNKAP51800 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.07■■□□□ 1.92
CLCNKAP51800 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CLCNKAP51800 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
CLCNKAP51800 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.05■■□□□ 1.92
CLCNKAP51800 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
CLCNKAP51800 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CLCNKAP51800 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CLCNKAP51800 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.02■■□□□ 1.92
CLCNKAP51800 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.92
CLCNKAP51800 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.01■■□□□ 1.91
CLCNKAP51800 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CLCNKAP51800 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27■■□□□ 1.91
CLCNKAP51800 SUZ12P1-203ENST00000578195 985 ntBASIC27■■□□□ 1.91
CLCNKAP51800 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CLCNKAP51800 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27■■□□□ 1.91
CLCNKAP51800 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CLCNKAP51800 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.99■■□□□ 1.91
CLCNKAP51800 CAHM-201ENST00000604200 896 ntBASIC26.99■■□□□ 1.91
CLCNKAP51800 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CLCNKAP51800 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.97■■□□□ 1.91
CLCNKAP51800 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.97■■□□□ 1.91
CLCNKAP51800 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CLCNKAP51800 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CLCNKAP51800 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.96■■□□□ 1.91
CLCNKAP51800 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CLCNKAP51800 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.95■■□□□ 1.9
CLCNKAP51800 AL391121.1-201ENST00000607967 1349 ntBASIC26.94■■□□□ 1.9
CLCNKAP51800 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
CLCNKAP51800 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CLCNKAP51800 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.92■■□□□ 1.9
CLCNKAP51800 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CLCNKAP51800 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
CLCNKAP51800 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.91■■□□□ 1.9
CLCNKAP51800 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CLCNKAP51800 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CLCNKAP51800 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.89■■□□□ 1.89
CLCNKAP51800 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CLCNKAP51800 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
CLCNKAP51800 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.86■■□□□ 1.89
CLCNKAP51800 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CLCNKAP51800 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CLCNKAP51800 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CLCNKAP51800 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CLCNKAP51800 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CLCNKAP51800 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CLCNKAP51800 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CLCNKAP51800 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.81■■□□□ 1.88
CLCNKAP51800 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CLCNKAP51800 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CLCNKAP51800 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.79■■□□□ 1.88
CLCNKAP51800 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CLCNKAP51800 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.77■■□□□ 1.88
CLCNKAP51800 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CLCNKAP51800 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CLCNKAP51800 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CLCNKAP51800 WASH5P-204ENST00000632292 975 ntBASIC26.76■■□□□ 1.87
CLCNKAP51800 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CLCNKAP51800 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.75■■□□□ 1.87
CLCNKAP51800 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CLCNKAP51800 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CLCNKAP51800 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CLCNKAP51800 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CLCNKAP51800 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CLCNKAP51800 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.72■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms