Protein–RNA interactions for Protein: P41271

NBL1, Neuroblastoma suppressor of tumorigenicity 1, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBL1P41271 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
NBL1P41271 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.64■■■□□ 2.18
NBL1P41271 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.64■■■□□ 2.18
NBL1P41271 AC087741.3-201ENST00000624270 1347 ntBASIC28.64■■■□□ 2.17
NBL1P41271 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.6■■■□□ 2.17
NBL1P41271 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.59■■■□□ 2.17
NBL1P41271 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
NBL1P41271 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.56■■■□□ 2.16
NBL1P41271 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
NBL1P41271 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.55■■■□□ 2.16
NBL1P41271 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.54■■■□□ 2.16
NBL1P41271 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
NBL1P41271 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.54■■■□□ 2.16
NBL1P41271 AC044849.2-201ENST00000606596 710 ntBASIC28.54■■■□□ 2.16
NBL1P41271 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.54■■■□□ 2.16
NBL1P41271 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.52■■■□□ 2.16
NBL1P41271 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
NBL1P41271 DUX4L28-201ENST00000623687 678 ntBASIC28.49■■■□□ 2.15
NBL1P41271 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
NBL1P41271 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
NBL1P41271 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.48■■■□□ 2.15
NBL1P41271 AL133380.1-201ENST00000506013 324 ntBASIC28.47■■■□□ 2.15
NBL1P41271 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.45■■■□□ 2.14
NBL1P41271 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
NBL1P41271 ZNRF2P2-203ENST00000454624 420 ntBASIC28.43■■■□□ 2.14
NBL1P41271 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
NBL1P41271 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NBL1P41271 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NBL1P41271 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NBL1P41271 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.38■■■□□ 2.13
NBL1P41271 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.38■■■□□ 2.13
NBL1P41271 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NBL1P41271 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
NBL1P41271 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.37■■■□□ 2.13
NBL1P41271 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.37■■■□□ 2.13
NBL1P41271 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.35■■■□□ 2.13
NBL1P41271 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.34■■■□□ 2.13
NBL1P41271 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NBL1P41271 MIR4449-201ENST00000578365 66 ntBASIC28.3■■■□□ 2.12
NBL1P41271 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NBL1P41271 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
NBL1P41271 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
NBL1P41271 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
NBL1P41271 AC005559.1-201ENST00000589661 871 ntBASIC28.26■■■□□ 2.11
NBL1P41271 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.25■■■□□ 2.11
NBL1P41271 MIR762-201ENST00000390236 83 ntBASIC28.25■■■□□ 2.11
NBL1P41271 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
NBL1P41271 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
NBL1P41271 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
NBL1P41271 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.23■■■□□ 2.11
NBL1P41271 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NBL1P41271 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.22■■■□□ 2.11
NBL1P41271 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
NBL1P41271 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
NBL1P41271 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.18■■■□□ 2.1
NBL1P41271 AC145285.7-201ENST00000614819 1539 ntBASIC28.17■■■□□ 2.1
NBL1P41271 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.16■■■□□ 2.1
NBL1P41271 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.13■■■□□ 2.09
NBL1P41271 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
NBL1P41271 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
NBL1P41271 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
NBL1P41271 MIR639-201ENST00000384974 98 ntBASIC28.11■■■□□ 2.09
NBL1P41271 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.1■■■□□ 2.09
NBL1P41271 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
NBL1P41271 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
NBL1P41271 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
NBL1P41271 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC28.09■■■□□ 2.09
NBL1P41271 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
NBL1P41271 HSD17B1P1-201ENST00000590052 955 ntBASIC28.08■■■□□ 2.09
NBL1P41271 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
NBL1P41271 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.06■■■□□ 2.08
NBL1P41271 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.06■■■□□ 2.08
NBL1P41271 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
NBL1P41271 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.06■■■□□ 2.08
NBL1P41271 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
NBL1P41271 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
NBL1P41271 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.02■■■□□ 2.08
NBL1P41271 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
NBL1P41271 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.02■■■□□ 2.08
NBL1P41271 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
NBL1P41271 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
NBL1P41271 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28■■■□□ 2.07
NBL1P41271 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
NBL1P41271 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.99■■■□□ 2.07
NBL1P41271 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.99■■■□□ 2.07
NBL1P41271 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.98■■■□□ 2.07
NBL1P41271 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.97■■■□□ 2.07
NBL1P41271 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.97■■■□□ 2.07
NBL1P41271 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
NBL1P41271 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
NBL1P41271 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.92■■■□□ 2.06
NBL1P41271 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.92■■■□□ 2.06
NBL1P41271 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.89■■■□□ 2.05
NBL1P41271 DUX4L29-201ENST00000425409 679 ntBASIC27.88■■■□□ 2.05
NBL1P41271 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.88■■■□□ 2.05
NBL1P41271 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.88■■■□□ 2.05
NBL1P41271 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.87■■■□□ 2.05
NBL1P41271 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
NBL1P41271 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
NBL1P41271 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.84■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms