Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NEBP20929 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC11.45□□□□□ -0.58
NEBP20929 AC087741.3-201ENST00000624270 1347 ntBASIC11.45□□□□□ -0.58
NEBP20929 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC11.45□□□□□ -0.58
NEBP20929 MIR935-201ENST00000401179 91 ntBASIC11.45□□□□□ -0.58
NEBP20929 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NEBP20929 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC11.44□□□□□ -0.58
NEBP20929 ABHD17AP3-201ENST00000503096 1137 ntBASIC11.44□□□□□ -0.58
NEBP20929 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC11.44□□□□□ -0.58
NEBP20929 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NEBP20929 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
NEBP20929 MACF1-219ENST00000484793 834 ntTSL 2 BASIC11.43□□□□□ -0.58
NEBP20929 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
NEBP20929 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
NEBP20929 ZNRF2P2-203ENST00000454624 420 ntBASIC11.42□□□□□ -0.58
NEBP20929 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NEBP20929 AL391121.1-201ENST00000607967 1349 ntBASIC11.42□□□□□ -0.58
NEBP20929 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC11.41□□□□□ -0.58
NEBP20929 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
NEBP20929 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC11.41□□□□□ -0.58
NEBP20929 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
NEBP20929 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NEBP20929 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC11.4□□□□□ -0.58
NEBP20929 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NEBP20929 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NEBP20929 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NEBP20929 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
NEBP20929 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC11.38□□□□□ -0.59
NEBP20929 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC11.37□□□□□ -0.59
NEBP20929 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
NEBP20929 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
NEBP20929 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NEBP20929 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
NEBP20929 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NEBP20929 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NEBP20929 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NEBP20929 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NEBP20929 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC11.34□□□□□ -0.59
NEBP20929 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NEBP20929 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
NEBP20929 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC11.33□□□□□ -0.6
NEBP20929 DUX4L28-201ENST00000623687 678 ntBASIC11.32□□□□□ -0.6
NEBP20929 MTURN-203ENST00000409688 843 ntTSL 2 BASIC11.32□□□□□ -0.6
NEBP20929 ABHD17AP5-201ENST00000580133 923 ntBASIC11.32□□□□□ -0.6
NEBP20929 HGH1-207ENST00000628266 258 ntTSL 5 BASIC11.31□□□□□ -0.6
NEBP20929 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NEBP20929 EBPL-203ENST00000378270 579 ntTSL 2 BASIC11.31□□□□□ -0.6
NEBP20929 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
NEBP20929 RNF166-209ENST00000567844 633 ntTSL 5 BASIC11.28□□□□□ -0.6
NEBP20929 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NEBP20929 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
NEBP20929 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NEBP20929 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NEBP20929 AC018358.1-201ENST00000631079 1402 ntBASIC11.27□□□□□ -0.61
NEBP20929 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NEBP20929 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NEBP20929 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
NEBP20929 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC11.25□□□□□ -0.61
NEBP20929 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NEBP20929 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NEBP20929 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
NEBP20929 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NEBP20929 AC044849.2-201ENST00000606596 710 ntBASIC11.25□□□□□ -0.61
NEBP20929 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NEBP20929 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC11.24□□□□□ -0.61
NEBP20929 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC11.24□□□□□ -0.61
NEBP20929 RARRES2P2-201ENST00000394842 485 ntBASIC11.24□□□□□ -0.61
NEBP20929 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NEBP20929 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NEBP20929 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NEBP20929 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NEBP20929 CR559946.2-201ENST00000623684 991 ntBASIC11.23□□□□□ -0.61
NEBP20929 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC11.22□□□□□ -0.61
NEBP20929 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
NEBP20929 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
NEBP20929 MIR762-201ENST00000390236 83 ntBASIC11.19□□□□□ -0.62
NEBP20929 AC016575.1-201ENST00000607026 382 ntBASIC11.19□□□□□ -0.62
NEBP20929 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NEBP20929 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC11.18□□□□□ -0.62
NEBP20929 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NEBP20929 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC11.18□□□□□ -0.62
NEBP20929 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
NEBP20929 BOD1-206ENST00000480951 814 ntTSL 2 BASIC11.16□□□□□ -0.62
NEBP20929 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NEBP20929 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
NEBP20929 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC11.15□□□□□ -0.62
NEBP20929 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
NEBP20929 MIR3648-2-201ENST00000581792 180 ntBASIC11.13□□□□□ -0.63
NEBP20929 MIR3648-1-201ENST00000615959 180 ntBASIC11.13□□□□□ -0.63
NEBP20929 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC11.13□□□□□ -0.63
NEBP20929 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NEBP20929 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NEBP20929 CHML-205ENST00000638160 705 ntTSL 3 BASIC11.12□□□□□ -0.63
NEBP20929 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NEBP20929 AC005559.1-201ENST00000589661 871 ntBASIC11.12□□□□□ -0.63
NEBP20929 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
NEBP20929 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
NEBP20929 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
NEBP20929 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
NEBP20929 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms