Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
NPHS1O60500 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.26■■□□□ 1.95
NPHS1O60500 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.25■■□□□ 1.95
NPHS1O60500 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
NPHS1O60500 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
NPHS1O60500 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
NPHS1O60500 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.23■■□□□ 1.95
NPHS1O60500 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.23■■□□□ 1.95
NPHS1O60500 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
NPHS1O60500 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
NPHS1O60500 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.21■■□□□ 1.95
NPHS1O60500 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.2■■□□□ 1.95
NPHS1O60500 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
NPHS1O60500 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
NPHS1O60500 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.16■■□□□ 1.94
NPHS1O60500 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.16■■□□□ 1.94
NPHS1O60500 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.14■■□□□ 1.94
NPHS1O60500 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.14■■□□□ 1.94
NPHS1O60500 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
NPHS1O60500 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.13■■□□□ 1.93
NPHS1O60500 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
NPHS1O60500 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
NPHS1O60500 AC120057.4-201ENST00000624722 1615 ntBASIC27.1■■□□□ 1.93
NPHS1O60500 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
NPHS1O60500 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
NPHS1O60500 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
NPHS1O60500 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
NPHS1O60500 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
NPHS1O60500 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.01■■□□□ 1.91
NPHS1O60500 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
NPHS1O60500 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
NPHS1O60500 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
NPHS1O60500 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
NPHS1O60500 AC006077.2-201ENST00000623591 457 ntBASIC26.98■■□□□ 1.91
NPHS1O60500 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
NPHS1O60500 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.98■■□□□ 1.91
NPHS1O60500 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
NPHS1O60500 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
NPHS1O60500 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
NPHS1O60500 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
NPHS1O60500 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
NPHS1O60500 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.95■■□□□ 1.91
NPHS1O60500 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
NPHS1O60500 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
NPHS1O60500 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NPHS1O60500 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.92■■□□□ 1.9
NPHS1O60500 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NPHS1O60500 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
NPHS1O60500 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.9■■□□□ 1.9
NPHS1O60500 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NPHS1O60500 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
NPHS1O60500 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
NPHS1O60500 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NPHS1O60500 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
NPHS1O60500 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.87■■□□□ 1.89
NPHS1O60500 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NPHS1O60500 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.86■■□□□ 1.89
NPHS1O60500 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.86■■□□□ 1.89
NPHS1O60500 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
NPHS1O60500 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
NPHS1O60500 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
NPHS1O60500 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.84■■□□□ 1.89
NPHS1O60500 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NPHS1O60500 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NPHS1O60500 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
NPHS1O60500 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.81■■□□□ 1.88
NPHS1O60500 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NPHS1O60500 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.81■■□□□ 1.88
NPHS1O60500 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.79■■□□□ 1.88
NPHS1O60500 ABCB10P1-201ENST00000614297 2181 ntBASIC26.78■■□□□ 1.88
NPHS1O60500 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
NPHS1O60500 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.77■■□□□ 1.88
NPHS1O60500 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
NPHS1O60500 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
NPHS1O60500 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NPHS1O60500 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.74■■□□□ 1.87
NPHS1O60500 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
NPHS1O60500 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NPHS1O60500 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.73■■□□□ 1.87
NPHS1O60500 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
NPHS1O60500 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
NPHS1O60500 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
NPHS1O60500 ZNRF2P1-201ENST00000441407 443 ntBASIC26.71■■□□□ 1.87
NPHS1O60500 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
NPHS1O60500 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
NPHS1O60500 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.69■■□□□ 1.86
NPHS1O60500 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
NPHS1O60500 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.66■■□□□ 1.86
NPHS1O60500 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
NPHS1O60500 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.66■■□□□ 1.86
NPHS1O60500 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NPHS1O60500 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
NPHS1O60500 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
NPHS1O60500 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
NPHS1O60500 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.63■■□□□ 1.85
NPHS1O60500 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NPHS1O60500 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NPHS1O60500 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
NPHS1O60500 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
NPHS1O60500 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms