Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.78■■■□□ 2.36
TBC1D4O60343 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
TBC1D4O60343 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TBC1D4O60343 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TBC1D4O60343 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.76■■■□□ 2.36
TBC1D4O60343 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.76■■■□□ 2.36
TBC1D4O60343 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.76■■■□□ 2.35
TBC1D4O60343 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TBC1D4O60343 CAHM-201ENST00000604200 896 ntBASIC29.75■■■□□ 2.35
TBC1D4O60343 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
TBC1D4O60343 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
TBC1D4O60343 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
TBC1D4O60343 AL133380.1-201ENST00000506013 324 ntBASIC29.72■■■□□ 2.35
TBC1D4O60343 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.72■■■□□ 2.35
TBC1D4O60343 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
TBC1D4O60343 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
TBC1D4O60343 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
TBC1D4O60343 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
TBC1D4O60343 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
TBC1D4O60343 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.67■■■□□ 2.34
TBC1D4O60343 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
TBC1D4O60343 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.64■■■□□ 2.34
TBC1D4O60343 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
TBC1D4O60343 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
TBC1D4O60343 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TBC1D4O60343 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TBC1D4O60343 AL391121.1-201ENST00000607967 1349 ntBASIC29.6■■■□□ 2.33
TBC1D4O60343 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.59■■■□□ 2.33
TBC1D4O60343 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
TBC1D4O60343 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
TBC1D4O60343 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
TBC1D4O60343 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
TBC1D4O60343 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
TBC1D4O60343 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.52■■■□□ 2.32
TBC1D4O60343 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.5■■■□□ 2.31
TBC1D4O60343 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.49■■■□□ 2.31
TBC1D4O60343 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.47■■■□□ 2.31
TBC1D4O60343 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
TBC1D4O60343 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
TBC1D4O60343 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
TBC1D4O60343 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
TBC1D4O60343 RPS2P35-201ENST00000443417 897 ntBASIC29.41■■■□□ 2.3
TBC1D4O60343 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
TBC1D4O60343 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.38■■■□□ 2.29
TBC1D4O60343 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.37■■■□□ 2.29
TBC1D4O60343 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
TBC1D4O60343 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
TBC1D4O60343 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
TBC1D4O60343 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29.34■■■□□ 2.29
TBC1D4O60343 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
TBC1D4O60343 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
TBC1D4O60343 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.32■■■□□ 2.28
TBC1D4O60343 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
TBC1D4O60343 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
TBC1D4O60343 AL162393.1-201ENST00000437852 946 ntBASIC29.3■■■□□ 2.28
TBC1D4O60343 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
TBC1D4O60343 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.28■■■□□ 2.28
TBC1D4O60343 AP006261.1-201ENST00000584783 668 ntBASIC29.28■■■□□ 2.28
TBC1D4O60343 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
TBC1D4O60343 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.27■■■□□ 2.28
TBC1D4O60343 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.26■■■□□ 2.27
TBC1D4O60343 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
TBC1D4O60343 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
TBC1D4O60343 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.26■■■□□ 2.27
TBC1D4O60343 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
TBC1D4O60343 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
TBC1D4O60343 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
TBC1D4O60343 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
TBC1D4O60343 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.2■■■□□ 2.27
TBC1D4O60343 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
TBC1D4O60343 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.18■■■□□ 2.26
TBC1D4O60343 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.17■■■□□ 2.26
TBC1D4O60343 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
TBC1D4O60343 WASH5P-204ENST00000632292 975 ntBASIC29.16■■■□□ 2.26
TBC1D4O60343 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
TBC1D4O60343 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.15■■■□□ 2.26
TBC1D4O60343 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
TBC1D4O60343 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
TBC1D4O60343 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
TBC1D4O60343 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.14■■■□□ 2.26
TBC1D4O60343 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.13■■■□□ 2.25
TBC1D4O60343 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
TBC1D4O60343 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.11■■■□□ 2.25
TBC1D4O60343 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
TBC1D4O60343 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
TBC1D4O60343 MIR762-201ENST00000390236 83 ntBASIC29.1■■■□□ 2.25
TBC1D4O60343 MIR3665-201ENST00000578708 105 ntBASIC29.09■■■□□ 2.25
TBC1D4O60343 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.08■■■□□ 2.25
TBC1D4O60343 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
TBC1D4O60343 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.07■■■□□ 2.24
TBC1D4O60343 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
TBC1D4O60343 DUX4L28-201ENST00000623687 678 ntBASIC29.06■■■□□ 2.24
TBC1D4O60343 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
TBC1D4O60343 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.04■■■□□ 2.24
TBC1D4O60343 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
TBC1D4O60343 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.03■■■□□ 2.24
TBC1D4O60343 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
TBC1D4O60343 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
TBC1D4O60343 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
TBC1D4O60343 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms