Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
URB1O60287 MIR3665-201ENST00000578708 105 ntBASIC26.88■■□□□ 1.89
URB1O60287 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
URB1O60287 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
URB1O60287 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.84■■□□□ 1.89
URB1O60287 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.82■■□□□ 1.88
URB1O60287 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
URB1O60287 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
URB1O60287 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
URB1O60287 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
URB1O60287 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.76■■□□□ 1.87
URB1O60287 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
URB1O60287 AC044849.2-201ENST00000606596 710 ntBASIC26.73■■□□□ 1.87
URB1O60287 AC087741.3-201ENST00000624270 1347 ntBASIC26.73■■□□□ 1.87
URB1O60287 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
URB1O60287 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.71■■□□□ 1.87
URB1O60287 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.87
URB1O60287 AC145285.7-201ENST00000614819 1539 ntBASIC26.69■■□□□ 1.86
URB1O60287 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
URB1O60287 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.67■■□□□ 1.86
URB1O60287 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
URB1O60287 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.65■■□□□ 1.86
URB1O60287 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
URB1O60287 AL133380.1-201ENST00000506013 324 ntBASIC26.65■■□□□ 1.86
URB1O60287 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
URB1O60287 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.64■■□□□ 1.85
URB1O60287 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.64■■□□□ 1.85
URB1O60287 DUX4L28-201ENST00000623687 678 ntBASIC26.62■■□□□ 1.85
URB1O60287 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
URB1O60287 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
URB1O60287 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.6■■□□□ 1.85
URB1O60287 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.6■■□□□ 1.85
URB1O60287 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.59■■□□□ 1.85
URB1O60287 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.59■■□□□ 1.85
URB1O60287 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
URB1O60287 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.58■■□□□ 1.85
URB1O60287 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.58■■□□□ 1.84
URB1O60287 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
URB1O60287 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
URB1O60287 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.55■■□□□ 1.84
URB1O60287 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.55■■□□□ 1.84
URB1O60287 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
URB1O60287 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.51■■□□□ 1.83
URB1O60287 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
URB1O60287 MIR762-201ENST00000390236 83 ntBASIC26.5■■□□□ 1.83
URB1O60287 AC005559.1-201ENST00000589661 871 ntBASIC26.5■■□□□ 1.83
URB1O60287 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
URB1O60287 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.49■■□□□ 1.83
URB1O60287 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.49■■□□□ 1.83
URB1O60287 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
URB1O60287 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.46■■□□□ 1.83
URB1O60287 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.46■■□□□ 1.83
URB1O60287 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
URB1O60287 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
URB1O60287 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
URB1O60287 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
URB1O60287 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.44■■□□□ 1.82
URB1O60287 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
URB1O60287 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
URB1O60287 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
URB1O60287 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.42■■□□□ 1.82
URB1O60287 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.42■■□□□ 1.82
URB1O60287 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.39■■□□□ 1.81
URB1O60287 MIR4449-201ENST00000578365 66 ntBASIC26.39■■□□□ 1.81
URB1O60287 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
URB1O60287 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.38■■□□□ 1.81
URB1O60287 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
URB1O60287 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.37■■□□□ 1.81
URB1O60287 ZNRF2P2-203ENST00000454624 420 ntBASIC26.37■■□□□ 1.81
URB1O60287 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.37■■□□□ 1.81
URB1O60287 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.36■■□□□ 1.81
URB1O60287 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
URB1O60287 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.35■■□□□ 1.81
URB1O60287 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
URB1O60287 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
URB1O60287 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.32■■□□□ 1.8
URB1O60287 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
URB1O60287 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
URB1O60287 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.3■■□□□ 1.8
URB1O60287 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
URB1O60287 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
URB1O60287 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
URB1O60287 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.25■■□□□ 1.79
URB1O60287 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
URB1O60287 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
URB1O60287 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
URB1O60287 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.21■■□□□ 1.79
URB1O60287 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
URB1O60287 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.19■■□□□ 1.78
URB1O60287 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.19■■□□□ 1.78
URB1O60287 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.19■■□□□ 1.78
URB1O60287 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
URB1O60287 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.17■■□□□ 1.78
URB1O60287 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
URB1O60287 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
URB1O60287 MIR639-201ENST00000384974 98 ntBASIC26.14■■□□□ 1.78
URB1O60287 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
URB1O60287 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
URB1O60287 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.13■■□□□ 1.77
URB1O60287 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms