Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC18.88■□□□□ 0.61
RTL8CO15255 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTL8CO15255 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL8CO15255 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL8CO15255 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL8CO15255 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTL8CO15255 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL8CO15255 AL133380.1-201ENST00000506013 324 ntBASIC18.85■□□□□ 0.61
RTL8CO15255 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTL8CO15255 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.84■□□□□ 0.61
RTL8CO15255 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RTL8CO15255 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTL8CO15255 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RTL8CO15255 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL8CO15255 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL8CO15255 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTL8CO15255 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL8CO15255 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.78■□□□□ 0.6
RTL8CO15255 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RTL8CO15255 MIR7108-201ENST00000614319 87 ntBASIC18.77■□□□□ 0.6
RTL8CO15255 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.76■□□□□ 0.59
RTL8CO15255 ABHD17AP4-201ENST00000411545 909 ntBASIC18.76■□□□□ 0.59
RTL8CO15255 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.76■□□□□ 0.59
RTL8CO15255 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
RTL8CO15255 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.75■□□□□ 0.59
RTL8CO15255 MIR3665-201ENST00000578708 105 ntBASIC18.75■□□□□ 0.59
RTL8CO15255 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.74■□□□□ 0.59
RTL8CO15255 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC18.72■□□□□ 0.59
RTL8CO15255 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL8CO15255 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RTL8CO15255 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL8CO15255 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTL8CO15255 AC087741.3-201ENST00000624270 1347 ntBASIC18.69■□□□□ 0.58
RTL8CO15255 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTL8CO15255 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.68■□□□□ 0.58
RTL8CO15255 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTL8CO15255 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTL8CO15255 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.67■□□□□ 0.58
RTL8CO15255 DUX4L28-201ENST00000623687 678 ntBASIC18.67■□□□□ 0.58
RTL8CO15255 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.66■□□□□ 0.58
RTL8CO15255 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.66■□□□□ 0.58
RTL8CO15255 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RTL8CO15255 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTL8CO15255 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.65■□□□□ 0.58
RTL8CO15255 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTL8CO15255 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.61■□□□□ 0.57
RTL8CO15255 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.61■□□□□ 0.57
RTL8CO15255 MIR762-201ENST00000390236 83 ntBASIC18.6■□□□□ 0.57
RTL8CO15255 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RTL8CO15255 AC044849.2-201ENST00000606596 710 ntBASIC18.6■□□□□ 0.57
RTL8CO15255 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL8CO15255 HLA-V-202ENST00000446817 847 ntBASIC18.59■□□□□ 0.57
RTL8CO15255 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.59■□□□□ 0.57
RTL8CO15255 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RTL8CO15255 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC18.58■□□□□ 0.57
RTL8CO15255 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.58■□□□□ 0.56
RTL8CO15255 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTL8CO15255 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTL8CO15255 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.56■□□□□ 0.56
RTL8CO15255 AC005559.1-201ENST00000589661 871 ntBASIC18.56■□□□□ 0.56
RTL8CO15255 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.54■□□□□ 0.56
RTL8CO15255 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
RTL8CO15255 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RTL8CO15255 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.53■□□□□ 0.56
RTL8CO15255 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.53■□□□□ 0.56
RTL8CO15255 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
RTL8CO15255 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RTL8CO15255 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTL8CO15255 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTL8CO15255 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTL8CO15255 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.5■□□□□ 0.55
RTL8CO15255 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.5■□□□□ 0.55
RTL8CO15255 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTL8CO15255 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTL8CO15255 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTL8CO15255 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTL8CO15255 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTL8CO15255 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTL8CO15255 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.46■□□□□ 0.55
RTL8CO15255 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC18.46■□□□□ 0.55
RTL8CO15255 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.46■□□□□ 0.55
RTL8CO15255 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.46■□□□□ 0.55
RTL8CO15255 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.45■□□□□ 0.54
RTL8CO15255 ZNRF2P2-203ENST00000454624 420 ntBASIC18.45■□□□□ 0.54
RTL8CO15255 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.45■□□□□ 0.54
RTL8CO15255 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTL8CO15255 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RTL8CO15255 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTL8CO15255 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTL8CO15255 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.44■□□□□ 0.54
RTL8CO15255 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTL8CO15255 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL8CO15255 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RTL8CO15255 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL8CO15255 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.42■□□□□ 0.54
RTL8CO15255 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.42■□□□□ 0.54
RTL8CO15255 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTL8CO15255 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTL8CO15255 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.41■□□□□ 0.54
RTL8CO15255 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms