Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
DDX39AO00148 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.45■■■□□ 2.63
DDX39AO00148 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
DDX39AO00148 AC097358.2-201ENST00000607541 1159 ntBASIC31.43■■■□□ 2.62
DDX39AO00148 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.43■■■□□ 2.62
DDX39AO00148 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.42■■■□□ 2.62
DDX39AO00148 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
DDX39AO00148 AC136428.2-201ENST00000563187 214 ntBASIC31.38■■■□□ 2.61
DDX39AO00148 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
DDX39AO00148 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
DDX39AO00148 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.36■■■□□ 2.61
DDX39AO00148 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.36■■■□□ 2.61
DDX39AO00148 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
DDX39AO00148 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
DDX39AO00148 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.34■■■□□ 2.61
DDX39AO00148 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.33■■■□□ 2.61
DDX39AO00148 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.33■■■□□ 2.61
DDX39AO00148 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
DDX39AO00148 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
DDX39AO00148 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
DDX39AO00148 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
DDX39AO00148 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.31■■■□□ 2.6
DDX39AO00148 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
DDX39AO00148 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
DDX39AO00148 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.28■■■□□ 2.6
DDX39AO00148 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
DDX39AO00148 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
DDX39AO00148 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.24■■■□□ 2.59
DDX39AO00148 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
DDX39AO00148 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.23■■■□□ 2.59
DDX39AO00148 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
DDX39AO00148 AL133380.1-201ENST00000506013 324 ntBASIC31.22■■■□□ 2.59
DDX39AO00148 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.21■■■□□ 2.59
DDX39AO00148 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
DDX39AO00148 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
DDX39AO00148 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
DDX39AO00148 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.18■■■□□ 2.58
DDX39AO00148 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
DDX39AO00148 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
DDX39AO00148 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.12■■■□□ 2.57
DDX39AO00148 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
DDX39AO00148 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.1■■■□□ 2.57
DDX39AO00148 SUZ12P1-203ENST00000578195 985 ntBASIC31.1■■■□□ 2.57
DDX39AO00148 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
DDX39AO00148 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
DDX39AO00148 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.08■■■□□ 2.57
DDX39AO00148 CAHM-201ENST00000604200 896 ntBASIC31.08■■■□□ 2.57
DDX39AO00148 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
DDX39AO00148 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.07■■■□□ 2.56
DDX39AO00148 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
DDX39AO00148 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.05■■■□□ 2.56
DDX39AO00148 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
DDX39AO00148 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
DDX39AO00148 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.03■■■□□ 2.56
DDX39AO00148 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
DDX39AO00148 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.02■■■□□ 2.56
DDX39AO00148 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.02■■■□□ 2.56
DDX39AO00148 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
DDX39AO00148 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
DDX39AO00148 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.01■■■□□ 2.55
DDX39AO00148 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31■■■□□ 2.55
DDX39AO00148 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
DDX39AO00148 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
DDX39AO00148 AL391121.1-201ENST00000607967 1349 ntBASIC30.98■■■□□ 2.55
DDX39AO00148 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
DDX39AO00148 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
DDX39AO00148 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
DDX39AO00148 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
DDX39AO00148 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.91■■■□□ 2.54
DDX39AO00148 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
DDX39AO00148 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
DDX39AO00148 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
DDX39AO00148 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
DDX39AO00148 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
DDX39AO00148 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
DDX39AO00148 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
DDX39AO00148 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
DDX39AO00148 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.87■■■□□ 2.53
DDX39AO00148 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
DDX39AO00148 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
DDX39AO00148 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.84■■■□□ 2.53
DDX39AO00148 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.84■■■□□ 2.53
DDX39AO00148 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
DDX39AO00148 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.83■■■□□ 2.53
DDX39AO00148 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
DDX39AO00148 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
DDX39AO00148 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
DDX39AO00148 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.8■■■□□ 2.52
DDX39AO00148 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
DDX39AO00148 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.78■■■□□ 2.52
DDX39AO00148 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
DDX39AO00148 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.76■■■□□ 2.51
DDX39AO00148 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
DDX39AO00148 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
DDX39AO00148 WASH5P-204ENST00000632292 975 ntBASIC30.75■■■□□ 2.51
DDX39AO00148 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
DDX39AO00148 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
DDX39AO00148 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
DDX39AO00148 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
DDX39AO00148 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms