Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
TBC1D3FA6NER0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
TBC1D3FA6NER0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.97■■■□□ 2.07
TBC1D3FA6NER0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
TBC1D3FA6NER0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.96■■■□□ 2.07
TBC1D3FA6NER0 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
TBC1D3FA6NER0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.95■■■□□ 2.06
TBC1D3FA6NER0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.95■■■□□ 2.06
TBC1D3FA6NER0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
TBC1D3FA6NER0 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
TBC1D3FA6NER0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.94■■■□□ 2.06
TBC1D3FA6NER0 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.93■■■□□ 2.06
TBC1D3FA6NER0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.93■■■□□ 2.06
TBC1D3FA6NER0 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.92■■■□□ 2.06
TBC1D3FA6NER0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
TBC1D3FA6NER0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
TBC1D3FA6NER0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
TBC1D3FA6NER0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
TBC1D3FA6NER0 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
TBC1D3FA6NER0 AL133380.1-201ENST00000506013 324 ntBASIC27.89■■■□□ 2.06
TBC1D3FA6NER0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
TBC1D3FA6NER0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
TBC1D3FA6NER0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.88■■■□□ 2.05
TBC1D3FA6NER0 CAHM-201ENST00000604200 896 ntBASIC27.88■■■□□ 2.05
TBC1D3FA6NER0 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
TBC1D3FA6NER0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
TBC1D3FA6NER0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.79■■■□□ 2.04
TBC1D3FA6NER0 AL391121.1-201ENST00000607967 1349 ntBASIC27.79■■■□□ 2.04
TBC1D3FA6NER0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TBC1D3FA6NER0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.78■■■□□ 2.04
TBC1D3FA6NER0 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
TBC1D3FA6NER0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
TBC1D3FA6NER0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.75■■■□□ 2.03
TBC1D3FA6NER0 RPS2P35-201ENST00000443417 897 ntBASIC27.74■■■□□ 2.03
TBC1D3FA6NER0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TBC1D3FA6NER0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.74■■■□□ 2.03
TBC1D3FA6NER0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TBC1D3FA6NER0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.73■■■□□ 2.03
TBC1D3FA6NER0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
TBC1D3FA6NER0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
TBC1D3FA6NER0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
TBC1D3FA6NER0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
TBC1D3FA6NER0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.65■■■□□ 2.02
TBC1D3FA6NER0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
TBC1D3FA6NER0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
TBC1D3FA6NER0 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
TBC1D3FA6NER0 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TBC1D3FA6NER0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.58■■■□□ 2.01
TBC1D3FA6NER0 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TBC1D3FA6NER0 AP006261.1-201ENST00000584783 668 ntBASIC27.56■■■□□ 2
TBC1D3FA6NER0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TBC1D3FA6NER0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.54■■■□□ 2
TBC1D3FA6NER0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.54■■■□□ 2
TBC1D3FA6NER0 AL162393.1-201ENST00000437852 946 ntBASIC27.54■■■□□ 2
TBC1D3FA6NER0 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.54■■■□□ 2
TBC1D3FA6NER0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.53■■■□□ 2
TBC1D3FA6NER0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.52■■■□□ 2
TBC1D3FA6NER0 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.52■■■□□ 2
TBC1D3FA6NER0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
TBC1D3FA6NER0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.51■■□□□ 1.99
TBC1D3FA6NER0 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
TBC1D3FA6NER0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.5■■□□□ 1.99
TBC1D3FA6NER0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.49■■□□□ 1.99
TBC1D3FA6NER0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
TBC1D3FA6NER0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TBC1D3FA6NER0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
TBC1D3FA6NER0 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
TBC1D3FA6NER0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
TBC1D3FA6NER0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
TBC1D3FA6NER0 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.46■■□□□ 1.99
TBC1D3FA6NER0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.45■■□□□ 1.98
TBC1D3FA6NER0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
TBC1D3FA6NER0 MIR3665-201ENST00000578708 105 ntBASIC27.41■■□□□ 1.98
TBC1D3FA6NER0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TBC1D3FA6NER0 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
TBC1D3FA6NER0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TBC1D3FA6NER0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TBC1D3FA6NER0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TBC1D3FA6NER0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TBC1D3FA6NER0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.39■■□□□ 1.98
TBC1D3FA6NER0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.39■■□□□ 1.98
TBC1D3FA6NER0 MIR762-201ENST00000390236 83 ntBASIC27.38■■□□□ 1.97
TBC1D3FA6NER0 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.38■■□□□ 1.97
TBC1D3FA6NER0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.38■■□□□ 1.97
TBC1D3FA6NER0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TBC1D3FA6NER0 WASH5P-204ENST00000632292 975 ntBASIC27.37■■□□□ 1.97
TBC1D3FA6NER0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TBC1D3FA6NER0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
TBC1D3FA6NER0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
TBC1D3FA6NER0 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TBC1D3FA6NER0 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
TBC1D3FA6NER0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
TBC1D3FA6NER0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
TBC1D3FA6NER0 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TBC1D3FA6NER0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TBC1D3FA6NER0 AC005559.1-201ENST00000589661 871 ntBASIC27.3■■□□□ 1.96
TBC1D3FA6NER0 DUX4L28-201ENST00000623687 678 ntBASIC27.3■■□□□ 1.96
TBC1D3FA6NER0 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.3■■□□□ 1.96
TBC1D3FA6NER0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TBC1D3FA6NER0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms